* installing *source* package 'rcontroll' ... ** package 'rcontroll' successfully unpacked and MD5 sums checked ** using staged installation ********************************************** WARNING: this package has a configure script It probably needs manual configuration ********************************************** ** libs using C++ compiler: 'g++.exe (GCC) 12.3.0' make[1]: Entering directory '/d/temp/Rtmp0QGIqq/R.INSTALL190506bbb2ee/rcontroll/src' rm -f rcontroll.dll RcppExports.o troll_rcpp.o g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/RcppGSL/include' -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/RcppGSL/include' -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c troll_rcpp.cpp -o troll_rcpp.o troll_rcpp.cpp: In function 'std::string GetParameter(std::string&, std::vector<std::__cxx11::basic_string<char> >&, std::vector<std::__cxx11::basic_string<char> >&)': troll_rcpp.cpp:1170:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long long unsigned int'} [-Wsign-compare] 1170 | while(parameter_index < parameter_names.size() && parameter_names[parameter_index] != parameter_name) parameter_index++; | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ troll_rcpp.cpp:1172:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long long unsigned int'} [-Wsign-compare] 1172 | if(parameter_index < parameter_names.size()) parameter_value = parameter_values[parameter_index]; | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ troll_rcpp.cpp: In function 'void OutputCrownSliced(int, int, int, std::vector<float>&)': troll_rcpp.cpp:3433:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<float>::size_type' {aka 'long long unsigned int'} [-Wsign-compare] 3433 | for(int i = 0; i < output_statistics.size();i++){ | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In copy constructor 'Species::Species(const Species&)', inlined from 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = Species; _Args = {const Species&}; _Tp = Species]' at d:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.3.0\include\c++\bits\new_allocator.h:175:4, inlined from 'static void std::allocator_traits<std::allocator<_Tp1> >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = Species; _Args = {const Species&}; _Tp = Species]' at d:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.3.0\include\c++\bits\alloc_traits.h:516:17, inlined from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Species; _Alloc = std::allocator<Species>]' at d:\rtools43\x86_64-w64-mingw32.static.posix\lib\gcc\x86_64-w64-mingw32.static.posix\12.3.0\include\c++\bits\stl_vector.h:1281:30, inlined from 'void ReadInputSpecies()' at troll_rcpp.cpp:4196:16: troll_rcpp.cpp:558:7: warning: 'species_dummy.Species::s_nbext' may be used uninitialized [-Wmaybe-uninitialized] 558 | class Species { | ^~~~~~~ troll_rcpp.cpp: In function 'void ReadInputSpecies()': troll_rcpp.cpp:4195:13: note: 'species_dummy' declared here 4195 | Species species_dummy; // !!!: currently, species at 0 is not initialized, for legacy reasons, maybe to change | ^~~~~~~~~~~~~ g++ -std=gnu++17 -shared -s -static-libgcc -o rcontroll.dll tmp.def RcppExports.o troll_rcpp.o -L/usr/lib/mxe/usr/x86_64-w64-mingw32.static.posix/lib -lgsl -lgslcblas -lm -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.3.3/bin/x64 -lR make[1]: Leaving directory '/d/temp/Rtmp0QGIqq/R.INSTALL190506bbb2ee/rcontroll/src' make[1]: Entering directory '/d/temp/Rtmp0QGIqq/R.INSTALL190506bbb2ee/rcontroll/src' make[1]: Leaving directory '/d/temp/Rtmp0QGIqq/R.INSTALL190506bbb2ee/rcontroll/src' installing to d:/Rcompile/CRANpkg/lib/4.3/00LOCK-rcontroll/00new/rcontroll/libs/x64 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'rcontroll' as rcontroll_0.1.2.zip * DONE (rcontroll)