* installing *source* package 'missSOM' ...
** package 'missSOM' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 12.3.0'
make[1]: Entering directory '/d/temp/RtmpKO2QBB/R.INSTALL280ac4a00290d/missSOM/src'
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c distance-functions.cpp -o distance-functions.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c imputeSOM.cpp -o imputeSOM.o
imputeSOM.cpp: In function 'Rcpp::List RcppImputeSOM(Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::ExpressionVector, Rcpp::NumericMatrix, int, Rcpp::NumericVector, Rcpp::NumericVector, int, bool, Rcpp::IntegerVector, Rcpp::IntegerVector)':
imputeSOM.cpp:177:45: warning: 'threshold' may be used uninitialized [-Wmaybe-uninitialized]
  177 |           tmp_bis = neighbourhoodFunctionPtr(pNeighbourhoodDistances[numCodes * nearest + cd], threshold);
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
imputeSOM.cpp:63:25: note: 'threshold' was declared here
   63 |   double distance, tmp, threshold, alpha;
      |                         ^~~~~~~~~
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c map.cpp -o map.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c neighbourhood-functions.cpp -o neighbourhood-functions.o
g++ -std=gnu++17 -shared -s -static-libgcc -o missSOM.dll tmp.def RcppExports.o distance-functions.o imputeSOM.o map.o neighbourhood-functions.o -fopenmp -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.3.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/RtmpKO2QBB/R.INSTALL280ac4a00290d/missSOM/src'
make[1]: Entering directory '/d/temp/RtmpKO2QBB/R.INSTALL280ac4a00290d/missSOM/src'
make[1]: Leaving directory '/d/temp/RtmpKO2QBB/R.INSTALL280ac4a00290d/missSOM/src'
installing to d:/Rcompile/CRANpkg/lib/4.3/00LOCK-missSOM/00new/missSOM/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'missSOM' as missSOM_1.0.1.zip
* DONE (missSOM)