- using R version 4.4.3 (2025-02-28 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 13.3.0
GNU Fortran (GCC) 13.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'malariaAtlas/DESCRIPTION' ... OK
- this is package 'malariaAtlas' version '1.6.4'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'malariaAtlas' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s] OK
- checking whether the package can be loaded with stated dependencies ... [2s] OK
- checking whether the package can be unloaded cleanly ... [2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [2s] OK
- checking whether the namespace can be unloaded cleanly ... [2s] OK
- checking loading without being on the library search path ... [2s] OK
- checking whether startup messages can be suppressed ... [2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [11s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [6s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [7s] OK
Running 'testthat.R' [7s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [13m] ERROR
Error(s) in re-building vignettes:
--- re-building 'overview.Rmd' using rmarkdown
Quitting from overview.Rmd:199-201 [unnamed-chunk-25]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Cannot open "D:\temp\2025_11_12_01_50_01_6119\RtmpcFdGvs\filed72012155691.json"; The source could be corrupt or not supported. See `st_drivers()` for a list of supported formats.
---
Backtrace:
▆
1. ├─ggplot2::autoplot(MDG_pr_data)
2. └─malariaAtlas:::autoplot.pr.points(MDG_pr_data)
3. └─malariaAtlas::getShp(ISO = unique_iso, format = "df", admin_level = admin_level_request)
4. └─malariaAtlas::listShp(...)
5. └─future.apply::future_lapply(...)
6. └─future.apply:::future_xapply(...)
7. └─base::tryCatch(...)
8. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
9. └─base (local) tryCatchOne(...)
10. └─value[[3L]](cond)
11. └─future.apply:::onError(e, futures = fs, debug = debug)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'overview.Rmd' failed with diagnostics:
Cannot open "D:\temp\2025_11_12_01_50_01_6119\RtmpcFdGvs\filed72012155691.json"; The source could be corrupt or not supported. See `st_drivers()` for a list of supported formats.
--- failed re-building 'overview.Rmd'
SUMMARY: processing the following file failed:
'overview.Rmd'
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [19s] OK
- checking HTML version of manual ... [11s] OK
- DONE
Status: 1 ERROR