* installing *source* package 'genoaligner' ...
** this is package 'genoaligner' version '1.0.0'
** package 'genoaligner' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.3.0'
using C++17
make[1]: Entering directory '/d/temp/2026_09_25_13_02_51_11550/RtmpYdUJ5d/R.INSTALL43cfc313112d5/genoaligner/src'
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I. -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c RcppExports.cpp -o RcppExports.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I. -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c align_rcpp.cpp -o align_rcpp.o
g++ -shared -s -static-libgcc -o genoaligner.dll tmp.def RcppExports.o align_rcpp.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.5.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_09_25_13_02_51_11550/RtmpYdUJ5d/R.INSTALL43cfc313112d5/genoaligner/src'
make[1]: Entering directory '/d/temp/2026_09_25_13_02_51_11550/RtmpYdUJ5d/R.INSTALL43cfc313112d5/genoaligner/src'
make[1]: Leaving directory '/d/temp/2026_09_25_13_02_51_11550/RtmpYdUJ5d/R.INSTALL43cfc313112d5/genoaligner/src'
installing to d:/Rcompile/CRANpkg/lib/4.5/00LOCK-genoaligner/00new/genoaligner/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'genoaligner' as genoaligner_1.0.0.zip
* DONE (genoaligner)