- using R version 4.4.3 (2025-02-28 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 13.3.0
GNU Fortran (GCC) 13.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'dyngen/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'dyngen' version '1.0.5'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'dyngen' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [5s] OK
- checking whether the package can be loaded with stated dependencies ... [4s] OK
- checking whether the package can be unloaded cleanly ... [5s] OK
- checking whether the namespace can be loaded with stated dependencies ... [5s] OK
- checking whether the namespace can be unloaded cleanly ... [5s] OK
- checking loading without being on the library search path ... [5s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [20s] OK
- checking Rd files ... [1s] NOTE
checkRd: (-1) generate_kinetics.Rd:57: Lost braces; missing escapes or markup?
57 | By default, sampled from {-1, 1} with probabilities {.25, .75}.
| ^
checkRd: (-1) generate_kinetics.Rd:57: Lost braces; missing escapes or markup?
57 | By default, sampled from {-1, 1} with probabilities {.25, .75}.
| ^
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... [5s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [15s] ERROR
Running examples in 'dyngen-Ex.R' failed
The error most likely occurred in:
> ### Name: get_timings
> ### Title: Return the timings of each of the dyngen steps
> ### Aliases: get_timings
>
> ### ** Examples
>
> data("example_model")
> timings <- get_timings(example_model)
Error in `summarise()`:
ℹ In argument: `task = .data$task[-length(.data$task)]`.
ℹ In group 2: `group = "2_tf_network"`.
Caused by error:
! `task` must be size 1, not 2.
ℹ To return more or less than 1 row per group, use `reframe()`.
Backtrace:
▆
1. ├─dyngen::get_timings(example_model)
2. │ └─model$timings %>% group_by(.data$group) %>% ...
3. ├─dplyr::summarise(...)
4. ├─dplyr:::summarise.grouped_df(...)
5. │ └─dplyr:::summarise_cols(.data, dplyr_quosures(...), by, "summarise")
6. │ └─base::withCallingHandlers(...)
7. ├─dplyr:::dplyr_internal_error(...)
8. │ └─rlang::abort(class = c(class, "dplyr:::internal_error"), dplyr_error_data = data)
9. │ └─rlang:::signal_abort(cnd, .file)
10. │ └─base::signalCondition(cnd)
11. └─dplyr (local) `<fn>`(`<dpl:::__>`)
12. └─dplyr (local) handler(cnd)
13. └─rlang::abort(message, class = error_class, parent = parent, call = error_call)
Execution halted
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [70s] OK
Running 'testthat.R' [69s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [2s] OK
- checking PDF version of manual ... [25s] OK
- checking HTML version of manual ... [7s] OK
- DONE
Status: 1 ERROR, 1 NOTE