- using R version 4.3.3 (2024-02-29 ucrt)
- using platform: x86_64-w64-mingw32 (64-bit)
- R was compiled by
gcc.exe (GCC) 12.3.0
GNU Fortran (GCC) 12.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'dartR/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'dartR' version '2.9.7'
- package encoding: UTF-8
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See the install log for details.
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- checking examples ... [101s] ERROR
Running examples in 'dartR-Ex.R' failed
The error most likely occurred in:
> ### Name: gl.pcoa.plot
> ### Title: Bivariate or trivariate plot of the results of an ordination
> ### generated using gl.pcoa()
> ### Aliases: gl.pcoa.plot
>
> ### ** Examples
>
> test <- gl.pcoa(platypus.gl)
Starting gl.pcoa
Processing genlight object with SNP data
Warning: data include loci that are scored NA across all individuals.
Consider filtering using gl <- gl.filter.allna(gl)
Performing a PCA, individuals as entities, loci as attributes, SNP genotype as state
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Running 'testthat.R' [17s]
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- DONE
Status: 1 ERROR