- using R version 4.5.3 (2026-03-11 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 14.3.0
GNU Fortran (GCC) 14.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'colleyRstats/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'colleyRstats' version '0.0.2'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'colleyRstats' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [6s] OK
- checking whether the package can be loaded with stated dependencies ... [5s] OK
- checking whether the package can be unloaded cleanly ... [6s] OK
- checking whether the namespace can be loaded with stated dependencies ... [6s] OK
- checking whether the namespace can be unloaded cleanly ... [7s] OK
- checking loading without being on the library search path ... [6s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... WARNING
Missing or unexported object: 'ggstatsplot::pairwise_comparisons'
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [18s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [24s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [20s] ERROR
Running 'testthat.R' [20s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(colleyRstats)
>
> test_check("colleyRstats")
Scale for x is already present.
Adding another scale for x, which will replace the existing scale.
Saving _problems/test-plotting-115.R
Saving _problems/test-plotting-132.R
The NPAV found a significant main effect of \Video on mental workload (\F{1}{10}{6.12}, \p{0.033}), $\eta_{p}^{2}$=0.38 [0.02, 1.00].
The NPAV found a significant interaction effect of \gesture $\times$ \eHMI on mental workload (\F{1}{10}{5.01}, \p{0.045}), $\eta_{p}^{2}$=0.33 [0.00, 1.00].
The ART found a significant interaction effect of \gesture $\times$ \eHMI on mental demand (\F{1}{10}{5.01}, \p{0.045}, $\eta_{p}^{2}$ = 0.33, 95\% CI: [0.00, 1.00]).
%B: \m{-0.44}, \sd{0.90}
Kruskal-Wallis rank sum test
data: x and g
Kruskal-Wallis chi-squared = 96.9374, df = 2, p-value = 0
Dunn's Pairwise Comparison of x by g
(Holm)
Col Mean-│
Row Mean │ setosa versicol
─────────┼──────────────────────
versicol │ -6.106326
│ 0.0000*
│
virginic │ -9.741784 -3.635458
│ 0.0000* 0.0003*
FWER = 0.05
Reject Ho if p ≤ FWER with stopping rule, where p = Pr(|Z| ≥ |z|)
A post-hoc test found that Sepal.Length for the \Species virginica was significantly higher (\m{6.59}, \sd{0.64}) than for setosa (\m{5.01}, \sd{0.35}; \padjminor{0.001}, \rankbiserial{0.97}) and versicolor (\m{5.94}, \sd{0.52}; \padjminor{0.001}, \rankbiserial{0.58}).
% latex table generated in R 4.5.3 by xtable 1.8-8 package
% Fri Apr 24 05:41:53 2026
\begin{table}[ht]
\centering
\caption{Post-hoc comparisons for independent variable \Species and dependent variable \Sepal.Length. Positive Z-values mean that the first-named level is sig. higher than the second-named. For negative Z-values, the opposite is true. Effect size reported as rank-biserial correlation (r).}
\label{tab:posthoc-Species-Sepal.Length}
\begingroup\small
\begin{tabular}{lrll}
\hline
Comparison & Z & p-adjusted & r \\
\hline
setosa - versicolor & -6.1063 & $<$0.001 & 0.87 \\
setosa - virginica & -9.7418 & $<$0.001 & 0.97 \\
versicolor - virginica & -3.6355 & $<$0.001 & 0.58 \\
\hline
\end{tabular}
\endgroup
\end{table}
Kruskal-Wallis rank sum test
data: x and g
Kruskal-Wallis chi-squared = 96.9374, df = 2, p-value = 0
Dunn's Pairwise Comparison of x by g
(Holm)
Col Mean-│
Row Mean │ setosa versicol
─────────┼──────────────────────
versicol │ -6.106326
│ 0.0000*
│
virginic │ -9.741784 -3.635458
│ 0.0000* 0.0003*
FWER = 0.05
Reject Ho if p ≤ FWER with stopping rule, where p = Pr(|Z| ≥ |z|)
% latex table generated in R 4.5.3 by xtable 1.8-8 package
% Fri Apr 24 05:41:54 2026
\begin{table}[ht]
\centering
\caption{Post-hoc comparisons for independent variable \Species and dependent variable \Sepal.Length. Positive Z-values mean that the first-named level is sig. higher than the second-named. For negative Z-values, the opposite is true. Effect size reported as rank-biserial correlation (r).}
\label{tab:posthoc-Species-Sepal.Length}
\begingroup\small
\begin{tabular}{lrll}
\hline
Comparison & Z & p-adjusted & r \\
\hline
setosa - versicolor & -6.1063 & $<$0.001 & 0.87 \\
setosa - virginica & -9.7418 & $<$0.001 & 0.97 \\
versicolor - virginica & -3.6355 & $<$0.001 & 0.58 \\
\hline
\end{tabular}
\endgroup
\end{table}
[ FAIL 2 | WARN 3 | SKIP 0 | PASS 62 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-plotting.R:109:3'): ggbetweenstatsWithPriorNormalityCheckAsterisk returns a ggplot object ──
Error: 'pairwise_comparisons' is not an exported object from 'namespace:ggstatsplot'
Backtrace:
▆
1. └─colleyRstats::ggbetweenstatsWithPriorNormalityCheckAsterisk(...) at test-plotting.R:109:3
2. ├─dplyr::filter(...)
3. ├─dplyr::mutate(...)
4. ├─dplyr::arrange(...)
5. └─dplyr::mutate(...)
── Error ('test-plotting.R:126:3'): ggwithinstatsWithPriorNormalityCheckAsterisk returns a ggplot object ──
Error: 'pairwise_comparisons' is not an exported object from 'namespace:ggstatsplot'
Backtrace:
▆
1. └─colleyRstats::ggwithinstatsWithPriorNormalityCheckAsterisk(...) at test-plotting.R:126:3
2. ├─dplyr::filter(...)
3. ├─dplyr::mutate(...)
4. ├─dplyr::arrange(...)
5. └─dplyr::mutate(...)
[ FAIL 2 | WARN 3 | SKIP 0 | PASS 62 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [23s] OK
- checking HTML version of manual ... [7s] OK
- DONE
Status: 1 ERROR, 1 WARNING