- using R version 4.5.3 (2026-03-11 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 14.3.0
GNU Fortran (GCC) 14.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'chevron/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'chevron' version '0.2.12'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'chevron' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [6s] OK
- checking whether the package can be loaded with stated dependencies ... [5s] OK
- checking whether the package can be unloaded cleanly ... [5s] OK
- checking whether the namespace can be loaded with stated dependencies ... [5s] OK
- checking whether the namespace can be unloaded cleanly ... [6s] OK
- checking loading without being on the library search path ... [6s] OK
- checking whether startup messages can be suppressed ... [6s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [21s] OK
- checking Rd files ... [3s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... [1s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [133s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [169s] OK
Running 'testthat.R' [168s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [217s] ERROR
Error(s) in re-building vignettes:
--- re-building 'chevron.Rmd' using rmarkdown
--- finished re-building 'chevron.Rmd'
--- re-building 'chevron_catalog.rmd' using rmarkdown
Quitting from chevron_catalog.rmd:1264-1271 [unnamed-chunk-102]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (alternative != "two.sided") ...`:
! argument is of length zero
---
Backtrace:
▆
1. ├─chevron::run(...)
2. ├─chevron::run(...)
3. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
4. │ └─base::do.call(what, new_args, envir = args_env)
5. ├─chevron (local) `<fn>`(adam_db = adam_db, stat_var = stat_var, control = control)
6. │ └─chevron:::execute_with_args(...)
7. │ └─chevron:::do_call(fun, args[intersect(names(args), formalArgs(fun))])
8. │ └─base::do.call(what, new_args, envir = args_env)
9. └─tern (local) `<fn>`(variables = variables, data = data, control = control)
10. └─tern::h_coxph_subgroups_df(...)
11. └─tern::h_coxph_df(...)
12. └─tern:::s_coxph_pairwise(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'chevron_catalog.rmd' failed with diagnostics:
argument is of length zero
--- failed re-building 'chevron_catalog.rmd'
--- re-building 'script_generator.Rmd' using rmarkdown
--- finished re-building 'script_generator.Rmd'
SUMMARY: processing the following file failed:
'chevron_catalog.rmd'
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [24s] OK
- checking HTML version of manual ... [29s] OK
- DONE
Status: 1 ERROR