• using R version 4.4.3 (2025-02-28 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 13.3.0     GNU Fortran (GCC) 13.3.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8
• checking for file 'bistablehistory/DESCRIPTION' ... OK
• this is package 'bistablehistory' version '1.1.3'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'bistablehistory' can be installed ... OK See the install log for details.
• used C++ compiler: 'g++.exe (GCC) 13.3.0'
• checking C++ specification ... OK   Not all R platforms support C++17
• checking installed package size ... OK
• checking package directory ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
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• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [5s] OK
• checking whether the package can be loaded with stated dependencies ... [4s] OK
• checking whether the package can be unloaded cleanly ... [5s] OK
• checking whether the namespace can be loaded with stated dependencies ... [5s] OK
• checking whether the namespace can be unloaded cleanly ... [4s] OK
• checking loading without being on the library search path ... [9s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [13s] OK
• checking Rd files ... [1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
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• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... [1s] OK
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• checking data for ASCII and uncompressed saves ... OK
• checking line endings in shell scripts ... OK
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• checking for GNU extensions in Makefiles ... NOTE GNU make is a SystemRequirements.
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
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• checking pragmas in C/C++ headers and code ... OK
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• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [14s] OK
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [17s] ERROR   Running 'testthat.R' [16s] Running the tests in 'tests/testthat.R' failed. Complete output:   > library(testthat)   > library(bistablehistory)   Loading required package: loo   This is loo version 2.9.0   - Online documentation and vignettes at mc-stan.org/loo   - As of v2.0.0 loo defaults to 1 core but we recommend using as many as possible. Use the 'cores' argument or set options(mc.cores = NUM_CORES) for an entire session.   - Windows 10 users: loo may be very slow if 'mc.cores' is set in your .Rprofile file (see https://github.com/stan-dev/loo/issues/94).      Attaching package: 'loo'      The following object is masked from 'package:testthat':          compare      Loading required package: rlang   Loading required package: rstantools   This is rstantools version 2.6.0      Attaching package: 'bistablehistory'      The following object is masked from 'package:loo':          loo      >   > test_check("bistablehistory")   Saving _problems/test-fit_and_post_fit_utilities-44.R   [ FAIL 1 | WARN 1 | SKIP 0 | PASS 97 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-fit_and_post_fit_utilities.R:44:3'): test fit and post fit utilities ──   Error in `dplyr::summarise(., DistributionParameter = rep(.data$DistributionParameter, dim(bF)[1]), Term = rep(.data$Term, dim(bF)[1]), .groups = "keep")`: ℹ In argument: `DistributionParameter = rep(.data$DistributionParameter,     dim(bF)[1])`.   ℹ In group 1: `DistributionParameter = 1`, `Term = 1`.   Caused by error:   ! `DistributionParameter` must be size 1, not 1000.   ℹ To return more or less than 1 row per group, use `reframe()`.   Backtrace:        ▆     1. ├─testthat::expect_s3_class(fixef(fit), "data.frame") at test-fit_and_post_fit_utilities.R:44:3     2. │ └─testthat::quasi_label(enquo(object))     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))     4. ├─bistablehistory::fixef(fit)     5. │ └─... %>% ...     6. ├─dplyr::mutate(...)     7. ├─dplyr::mutate(...)     8. ├─dplyr::mutate(., Estimate = c(bF))     9. ├─dplyr::ungroup(.)    10. ├─dplyr::summarise(...)    11. ├─dplyr:::summarise.grouped_df(...)    12. │ └─dplyr:::summarise_cols(.data, dplyr_quosures(...), by, "summarise")    13. │ └─base::withCallingHandlers(...)    14. ├─dplyr:::dplyr_internal_error(...)    15. │ └─rlang::abort(class = c(class, "dplyr:::internal_error"), dplyr_error_data = data)    16. │ └─rlang:::signal_abort(cnd, .file)    17. │ └─base::signalCondition(cnd)    18. └─dplyr (local) `<fn>`(`<dpl:::__>`)    19. └─dplyr (local) handler(cnd)    20. └─rlang::abort(message, class = error_class, parent = parent, call = error_call)      [ FAIL 1 | WARN 1 | SKIP 0 | PASS 97 ]   Error:   ! Test failures.   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [33s] ERROR Error(s) in re-building vignettes: --- re-building 'cumulative-history.Rmd' using rmarkdown Quitting from cumulative-history.Rmd:67-87 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `summarise()`: ℹ In argument: `t = t`. ℹ In group 1: `h0 = 0`, `S = 1`, `tau = 1`. Caused by error: ! `t` must be size 1, not 100. ℹ To return more or less than 1 row per group, use `reframe()`. --- Backtrace:     ▆  1. ├─... %>% ...  2. ├─dplyr::summarise(...)  3. ├─dplyr:::summarise.grouped_df(...)  4. │ └─dplyr:::summarise_cols(.data, dplyr_quosures(...), by, "summarise")  5. │ └─base::withCallingHandlers(...)  6. └─dplyr:::dplyr_internal_error(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'cumulative-history.Rmd' failed with diagnostics: ℹ In argument: `t = t`. ℹ In group 1: `h0 = 0`, `S = 1`, `tau = 1`. Caused by error: ! `t` must be size 1, not 100. ℹ To return more or less than 1 row per group, use `reframe()`. --- failed re-building 'cumulative-history.Rmd' --- re-building 'usage-examples.Rmd' using rmarkdown [WARNING] Citeproc: citation loo not found --- finished re-building 'usage-examples.Rmd' --- re-building 'writing-stan-code.Rmd' using rmarkdown --- finished re-building 'writing-stan-code.Rmd' SUMMARY: processing the following file failed:   'cumulative-history.Rmd' Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [19s] OK
• checking HTML version of manual ... [6s] OK
• DONE

Status: 2 ERRORs, 1 NOTE