• using R version 4.4.3 (2025-02-28 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 13.3.0     GNU Fortran (GCC) 13.3.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8
• checking for file 'TreeSearch/DESCRIPTION' ... OK
• this is package 'TreeSearch' version '1.6.1'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'TreeSearch' can be installed ... OK See the install log for details.
• used C compiler: 'gcc.exe (GCC) 13.3.0'
• used C++ compiler: 'g++.exe (GCC) 13.3.0'
• checking C++ specification ... OK   Not all R platforms support C++17
• checking installed package size ... NOTE   installed size is 5.7Mb   sub-directories of 1Mb or more:     datasets 1.6Mb     doc 1.3Mb     libs 1.1Mb
• checking package directory ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s] OK
• checking whether the package can be loaded with stated dependencies ... [3s] OK
• checking whether the package can be unloaded cleanly ... [2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s] OK
• checking whether the namespace can be unloaded cleanly ... [3s] OK
• checking loading without being on the library search path ... [3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [18s] OK
• checking Rd files ... [8s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... [2s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compiled code ... OK
• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [22s] OK
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [79s] ERROR   Running 'spelling.R' [0s]   Running 'testthat.R' [78s] Running the tests in 'tests/testthat.R' failed. Complete output:   > library("testthat")   > library("TreeSearch")   >   > test_check("TreeSearch")   [ FAIL 1 | WARN 0 | SKIP 5 | PASS 7330 ]      ══ Skipped tests (5) ═══════════════════════════════════════════════════════════   • On CRAN (4): 'test-Jackknife.R:42:3', 'test-PlotCharacter.R:46:7',     'test-PlotCharacter.R:143:3', 'test-PlotCharacter.R:177:3'   • Sys.getenv("GITHUB_PAT") == "" is TRUE (1): 'test-MaximizeParsimony.R:71:3'      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Failure ('test-CustomSearch.R:32:3'): Tree can be found ─────────────────────   all.equal(...) is not TRUE      `actual`: FALSE   `expected`: TRUE      [ FAIL 1 | WARN 0 | SKIP 5 | PASS 7330 ]   Deleting unused snapshots:   • PlotCharacter/plotchar-000011110000.svg   • PlotCharacter/plotchar-000011qqqq00.svg   • PlotCharacter/plotchar-011iiqii0011.svg   • PlotCharacter/plotchar-01iii1010101.svg   • PlotCharacter/plotchar-01iiii010101.svg   • PlotCharacter/plotchar-01iiiiii0101.svg   • PlotCharacter/plotchar-023iiqq1ii32.svg   • PlotCharacter/plotchar-023iqqq1ii32.svg   • PlotCharacter/plotchar-10101iiiii01.svg   • PlotCharacter/plotchar-10iiii11iii1.svg   • PlotCharacter/plotchar-1100iiii1100.svg   • PlotCharacter/plotchar-110iiqiii100.svg   • PlotCharacter/plotchar-110iiqqii100.svg   • PlotCharacter/plotchar-11ii1000001i.svg   • PlotCharacter/plotchar-11ii1qqii111.svg   • PlotCharacter/plotchar-11iiii111111.svg   • PlotCharacter/plotchar-11iiiiiii100.svg   • PlotCharacter/plotchar-11iiqqqqii11.svg   • PlotCharacter/plotchar-1234d45baacgttt.svg   • PlotCharacter/plotchar-1iii1111iii1.svg   • PlotCharacter/plotchar-1iiii1iiii1i.svg   • PlotCharacter/plotchar-1qqiiqqii100.svg   • PlotCharacter/plotchar-210210iiiiii.svg   • PlotCharacter/plotchar-210ii100ii21.svg   • PlotCharacter/plotchar-21ii1iiii012.svg   • PlotCharacter/plotchar-21ii3qqii032.svg   • PlotCharacter/plotchar-230iiqq1ii32.svg   • PlotCharacter/plotchar-23ii1iiii032.svg   • PlotCharacter/plotchar-23ii1q1ii023.svg   • PlotCharacter/plotchar-23ii1qqdi0bid01b32.svg   • PlotCharacter/plotchar-23qq1qqqq032.svg   • PlotCharacter/plotchar-320iiqq3ii21.svg   • PlotCharacter/plotchar-i1i1i1ii1i1i.svg   • PlotCharacter/plotchar-iiii1010iiii.svg   • PlotCharacter/plotchar-iiii1111iii1.svg   • PlotCharacter/plotchar-iiii1111iiii.svg   • PlotCharacter/plotchar-iiiiii11iii1.svg   • PlotCharacter/plotchar-iiiiiiii0101.svg   • PlotCharacter/plotchar-iiiiiiiiiiii.svg   • PlotCharacter/plotchar-iiiiiiiqqqqq.svg   • PlotCharacter/plotchar-invar-ambig.svg   • PlotCharacter/plotchar-invariant.svg   • PlotCharacter/plotchar-qqqqiiii1qqq.svg   • PlotCharacter/plotchar-qqqqqqqqqqqq.svg   Error: Test failures   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [114s] OK
• checking PDF version of manual ... [26s] OK
• checking HTML version of manual ... [18s] OK
• DONE

Status: 1 ERROR, 1 NOTE