- using R version 4.4.3 (2025-02-28 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 13.3.0
GNU Fortran (GCC) 13.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'OtsuFire/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'OtsuFire' version '0.1.4'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'OtsuFire' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [13s] OK
- checking whether the package can be loaded with stated dependencies ... [11s] OK
- checking whether the package can be unloaded cleanly ... [12s] OK
- checking whether the namespace can be loaded with stated dependencies ... [11s] OK
- checking whether the namespace can be unloaded cleanly ... [12s] OK
- checking loading without being on the library search path ... [13s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [32s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [15s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [13s] ERROR
Running 'testthat.R' [13s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(OtsuFire)
>
> test_check("OtsuFire")
Processing: D:\temp\2025_12_05_01_50_00_7414\RtmpyYcZXA\filef7f437dd6df7.geojson
200
Dissolving burned polygons by 'burned_id'
Added column 'regen_ratio_P1' with regeneration ratios for P1
Detected regeneration years: P1
Created 'regenera_flag_P1' using threshold(s) from 'global' (column: regen_ratio_P1)
Created 'regenera_flag_all' combining all defined periods.
Writing the complete shapefile (unfiltered): D:\temp\2025_12_05_01_50_00_7414\RtmpyYcZXA/filef7f437dd6df7_reg_thresh200_P1r0.01_.geojson
Saving filtered shapefile: D:\temp\2025_12_05_01_50_00_7414\RtmpyYcZXA/filef7f437dd6df7_reg_thresh200_P1r0.01__filter.geojson
Number of polygons after filtering: 1 (removed: 0)
Replacing original burned polygons by regenerated polygons in P1:
Saving _problems/test-mask_to_mosaic-9.R
[ FAIL 1 | WARN 1 | SKIP 9 | PASS 1 ]
══ Skipped tests (9) ═══════════════════════════════════════════════════════════
• On CRAN (9): 'test-calculate_doy_flags_basic.R:2:3',
'test-calculate_doy_flags_polygonize.R:4:3',
'test-calculate_polygon_metrics.R:2:3', 'test-generate_burnable_mask.R:2:3',
'test-mosaic_raster.R:3:3', 'test-process_otsu_rasters.R:2:3',
'test-process_otsu_regenera.R:2:3', 'test-validate_fire_map_basic.R:4:3',
'test-validate_fire_map_gdal.R:4:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-mask_to_mosaic.R:9:3'): mask_to_mosaic applies binary mask and optional clip correctly ──
Error: [rast] empty srs
Backtrace:
▆
1. ├─terra::rast(...) at test-mask_to_mosaic.R:9:3
2. └─terra::rast(...)
3. └─terra (local) .local(x = x, ...)
4. └─terra:::new_rast(...)
5. └─terra:::messages(r, "rast")
6. └─terra:::error(f, x@pntr$getError())
[ FAIL 1 | WARN 1 | SKIP 9 | PASS 1 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [23s] OK
- checking HTML version of manual ... [3s] OK
- DONE
Status: 1 ERROR