* installing *source* package 'KODAMA' ...
** package 'KODAMA' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.3.0'
using C++ compiler: 'g++.exe (GCC) 13.3.0'
make[1]: Entering directory '/d/temp/2025_10_03_01_50_00_13482/RtmpQ1DlkH/R.INSTALL2c1dca7a3e32/KODAMA/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I. -IANN -O3 -DWIN32 -DDLL_EXPORTS -DANN_NO_RANDOM -DRANN -DARMA_64BIT_WORD=1 -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rnanoflann/include' -I'D:/RCompile/CRANpkg/lib/4.4/Matrix/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
In file included from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/RcppArmadillo.h:32,
from RcppExports.cpp:6:
D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
gcc -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I. -IANN -O3 -DWIN32 -DDLL_EXPORTS -DANN_NO_RANDOM -DRANN -DARMA_64BIT_WORD=1 -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rnanoflann/include' -I'D:/RCompile/CRANpkg/lib/4.4/Matrix/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c irlba.c -o irlba.o
irlba.c: In function 'irlb':
irlba.c:443:21: warning: 'converged' may be used uninitialized [-Wmaybe-uninitialized]
443 | return (converged == 1 ? 0 : -2);
| ~~~~~~~~~~^~~~
irlba.c:171:7: note: 'converged' declared here
171 | int converged;
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I. -IANN -O3 -DWIN32 -DDLL_EXPORTS -DANN_NO_RANDOM -DRANN -DARMA_64BIT_WORD=1 -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/Rnanoflann/include' -I'D:/RCompile/CRANpkg/lib/4.4/Matrix/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c prova.cpp -o prova.o
In file included from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/RcppArmadillo.h:32,
from prova.cpp:19:
D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
prova.cpp: In function 'arma::ivec PLSDACV_simpls(arma::mat, arma::ivec, arma::ivec, int)':
prova.cpp:465:22: warning: 'eT arma::Mat<eT>::max(arma::uword&) const [with eT = double; arma::uword = long long unsigned int]' is deprecated: use .index_max() instead [-Wdeprecated-declarations]
465 | min_val = v22.max(index);
| ~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/current/armadillo:201:
D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/current/armadillo_bits/Mat_bones.hpp:545:56: note: declared here
545 | [[deprecated("use .index_max() instead")]] inline eT max(uword& index_of_max_val) const;
| ^~~
prova.cpp: In function 'arma::ivec PLSDACV_fastpls(arma::mat, arma::ivec, arma::ivec, int)':
prova.cpp:528:22: warning: 'eT arma::Mat<eT>::max(arma::uword&) const [with eT = double; arma::uword = long long unsigned int]' is deprecated: use .index_max() instead [-Wdeprecated-declarations]
528 | min_val = v22.max(index);
| ~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/current/armadillo:692:
D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/current/armadillo_bits/Mat_meat.hpp:7850:1: note: declared here
7850 | Mat<eT>::max(uword& index_of_max_val) const
| ^~~~~~~
prova.cpp: In function 'Rcpp::List corecpp(arma::mat, arma::mat, arma::ivec, int, int, int, arma::ivec, Rcpp::NumericVector, bool, int)':
prova.cpp:676:26: warning: 'eT arma::Mat<eT>::max(arma::uword&) const [with eT = double; arma::uword = long long unsigned int]' is deprecated: use .index_max() instead [-Wdeprecated-declarations]
676 | min_val = v22.max(index);
| ~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/current/armadillo_bits/Mat_meat.hpp:7850:1: note: declared here
7850 | Mat<eT>::max(uword& index_of_max_val) const
| ^~~~~~~
prova.cpp:693:26: warning: 'eT arma::Mat<eT>::max(arma::uword&) const [with eT = double; arma::uword = long long unsigned int]' is deprecated: use .index_max() instead [-Wdeprecated-declarations]
693 | min_val = v22.max(index);
| ~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/current/armadillo_bits/Mat_meat.hpp:7850:1: note: declared here
7850 | Mat<eT>::max(uword& index_of_max_val) const
| ^~~~~~~
g++ -std=gnu++17 -shared -s -static-libgcc -o KODAMA.dll tmp.def RcppExports.o irlba.o prova.o -L. -LD:/RCompile/recent/R-4.4.3/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.4.3/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2025_10_03_01_50_00_13482/RtmpQ1DlkH/R.INSTALL2c1dca7a3e32/KODAMA/src'
make[1]: Entering directory '/d/temp/2025_10_03_01_50_00_13482/RtmpQ1DlkH/R.INSTALL2c1dca7a3e32/KODAMA/src'
make[1]: Leaving directory '/d/temp/2025_10_03_01_50_00_13482/RtmpQ1DlkH/R.INSTALL2c1dca7a3e32/KODAMA/src'
installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-KODAMA/00new/KODAMA/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'KODAMA' as KODAMA_3.0.zip
* DONE (KODAMA)