- using R version 4.5.3 (2026-03-11 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 14.3.0
GNU Fortran (GCC) 14.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'ILORA/DESCRIPTION' ... OK
- this is package 'ILORA' version '0.1.1'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'ILORA' can be installed ... OK
See the install log for details.
- checking installed package size ... INFO
installed size is 14.5Mb
sub-directories of 1Mb or more:
extdata 13.7Mb
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [3s] OK
- checking whether the package can be loaded with stated dependencies ... [3s] OK
- checking whether the package can be unloaded cleanly ... [3s] OK
- checking whether the namespace can be loaded with stated dependencies ... [3s] OK
- checking whether the namespace can be unloaded cleanly ... [4s] OK
- checking loading without being on the library search path ... [4s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [10s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [7s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [6s] ERROR
Running 'testthat.R' [6s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ILORA)
>
> test_check("ILORA")
Saving _problems/test-get_data-5.R
Saving _problems/test-get_data-20.R
Saving _problems/test-get_data-38.R
Saving _problems/test-get_data-51.R
Saving _problems/test-get_data-67.R
Saving _problems/test-get_data-74.R
Saving _problems/test-get_data-109.R
[ FAIL 7 | WARN 0 | SKIP 10 | PASS 1 ]
══ Skipped tests (10) ══════════════════════════════════════════════════════════
• Database not reachable (1): 'test-get_data.R:317:1'
• On CRAN (9): 'test-get_data.R:160:3', 'test-get_data.R:177:3',
'test-get_data.R:190:3', 'test-get_data.R:206:3', 'test-get_data.R:222:3',
'test-get_data.R:234:3', 'test-get_data.R:249:3', 'test-get_data.R:267:3',
'test-get_data.R:296:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-get_data.R:5:3'): get_species_names includes known species if present ──
Error: could not translate host name "ilora-db19-ilora-2019.e.aivencloud.com" to address: Name or service not known
Backtrace:
▆
1. └─ILORA::get_species_names() at test-get_data.R:5:3
2. └─ILORA:::connect_ilora_db()
3. ├─DBI::dbConnect(...)
4. └─RPostgres::dbConnect(...)
5. └─RPostgres (local) .local(drv, ...)
6. └─RPostgres:::connection_create(names(opts), as.vector(opts), check_interrupts)
── Error ('test-get_data.R:20:3'): get_variable_names returns a named list of variables ──
Error: could not translate host name "ilora-db19-ilora-2019.e.aivencloud.com" to address: Name or service not known
Backtrace:
▆
1. └─ILORA::get_variable_names() at test-get_data.R:20:3
2. └─ILORA:::connect_ilora_db()
3. ├─DBI::dbConnect(...)
4. └─RPostgres::dbConnect(...)
5. └─RPostgres (local) .local(drv, ...)
6. └─RPostgres:::connection_create(names(opts), as.vector(opts), check_interrupts)
── Error ('test-get_data.R:38:3'): get_table_names returns a character vector ──
Error: could not translate host name "ilora-db19-ilora-2019.e.aivencloud.com" to address: Name or service not known
Backtrace:
▆
1. └─ILORA::get_table_names() at test-get_data.R:38:3
2. └─ILORA:::connect_ilora_db()
3. ├─DBI::dbConnect(...)
4. └─RPostgres::dbConnect(...)
5. └─RPostgres (local) .local(drv, ...)
6. └─RPostgres:::connection_create(names(opts), as.vector(opts), check_interrupts)
── Error ('test-get_data.R:48:3'): get_data returns a data frame for valid inputs ──
Error: could not translate host name "ilora-db19-ilora-2019.e.aivencloud.com" to address: Name or service not known
Backtrace:
▆
1. └─ILORA::get_data(...) at test-get_data.R:48:3
2. └─ILORA:::connect_ilora_db()
3. ├─DBI::dbConnect(...)
4. └─RPostgres::dbConnect(...)
5. └─RPostgres (local) .local(drv, ...)
6. └─RPostgres:::connection_create(names(opts), as.vector(opts), check_interrupts)
── Error ('test-get_data.R:64:3'): get_data returns error for invalid species ──
Error: could not translate host name "ilora-db19-ilora-2019.e.aivencloud.com" to address: Name or service not known
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-get_data.R:64:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─ILORA::get_data(...)
8. └─ILORA:::connect_ilora_db()
9. ├─DBI::dbConnect(...)
10. └─RPostgres::dbConnect(...)
11. └─RPostgres (local) .local(drv, ...)
12. └─RPostgres:::connection_create(names(opts), as.vector(opts), check_interrupts)
── Error ('test-get_data.R:74:3'): get_species_details retrieves correct details for a single species ──
Error: could not translate host name "ilora-db19-ilora-2019.e.aivencloud.com" to address: Name or service not known
Backtrace:
▆
1. └─ILORA::get_species_details(species_name) at test-get_data.R:74:3
2. └─ILORA:::connect_ilora_db()
3. ├─DBI::dbConnect(...)
4. └─RPostgres::dbConnect(...)
5. └─RPostgres (local) .local(drv, ...)
6. └─RPostgres:::connection_create(names(opts), as.vector(opts), check_interrupts)
── Error ('test-get_data.R:109:3'): get_species_details retrieves correct details for multiple species ──
Error: could not translate host name "ilora-db19-ilora-2019.e.aivencloud.com" to address: Name or service not known
Backtrace:
▆
1. └─ILORA::get_species_details(species_names) at test-get_data.R:109:3
2. └─ILORA:::connect_ilora_db()
3. ├─DBI::dbConnect(...)
4. └─RPostgres::dbConnect(...)
5. └─RPostgres (local) .local(drv, ...)
6. └─RPostgres:::connection_create(names(opts), as.vector(opts), check_interrupts)
[ FAIL 7 | WARN 0 | SKIP 10 | PASS 1 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [2s] OK
- checking PDF version of manual ... [16s] OK
- checking HTML version of manual ... [3s] OK
- DONE
Status: 1 ERROR