- using R version 4.5.3 (2026-03-11 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 14.3.0
GNU Fortran (GCC) 14.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'CongreveLamsdell2016/DESCRIPTION' ... OK
- this is package 'CongreveLamsdell2016' version '1.0.3'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'CongreveLamsdell2016' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s] OK
- checking whether the package can be loaded with stated dependencies ... [1s] OK
- checking whether the package can be unloaded cleanly ... [1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s] OK
- checking whether the namespace can be unloaded cleanly ... [2s] OK
- checking loading without being on the library search path ... [2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [5s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... [2s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking sizes of PDF files under 'inst/doc' ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [2s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [12m] ERROR
Error(s) in re-building vignettes:
--- re-building 'Compare-methods.Rmd' using rmarkdown
--- finished re-building 'Compare-methods.Rmd'
--- re-building 'Compare-node-supports.Rmd' using rmarkdown
Could not fetch http://www.zotero.org/styles/proceedings-of-the-royal-society-b
HttpExceptionRequest Request {
host = "www.zotero.org"
port = 80
secure = False
requestHeaders = []
path = "/styles/proceedings-of-the-royal-society-b"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(ConnectionFailure Network.Socket.connect: <socket: 940>: failed (Connection timed out (WSAETIMEDOUT)))
Error: processing vignette 'Compare-node-supports.Rmd' failed with diagnostics:
pandoc document conversion failed with error 61
--- failed re-building 'Compare-node-supports.Rmd'
--- re-building 'Conduct-analyses.Rmd' using rmarkdown
Could not fetch http://www.zotero.org/styles/proceedings-of-the-royal-society-b
HttpExceptionRequest Request {
host = "www.zotero.org"
port = 80
secure = False
requestHeaders = []
path = "/styles/proceedings-of-the-royal-society-b"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(ConnectionFailure Network.Socket.connect: <socket: 952>: failed (Connection timed out (WSAETIMEDOUT)))
Error: processing vignette 'Conduct-analyses.Rmd' failed with diagnostics:
pandoc document conversion failed with error 61
--- failed re-building 'Conduct-analyses.Rmd'
SUMMARY: processing the following files failed:
'Compare-node-supports.Rmd' 'Conduct-analyses.Rmd'
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [16s] OK
- checking HTML version of manual ... [2s] OK
- DONE
Status: 1 ERROR