* installing *source* package 'BayesDecon' ...
** package 'BayesDecon' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 13.3.0'
using C++17
make[1]: Entering directory '/d/temp/2026_01_12_17_46_52_4704/Rtmp4aU8mf/R.INSTALL1883024492b5d/BayesDecon/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c B_basis.cpp -o B_basis.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c chk_omp.cpp -o chk_omp.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c formcorr.cpp -o formcorr.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c mcmcmvt.cpp -o mcmcmvt.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c mcmcuniepi.cpp -o mcmcuniepi.o
mcmcuniepi.cpp: In function 'Rcpp::List mcmcuniepi_cpp(arma::uword, arma::uword, arma::uword, arma::uword, arma::vec, arma::vec, arma::vec, arma::uvec, arma::uvec, double, double, bool, arma::uword, arma::vec, arma::vec, arma::mat, arma::uword, arma::uword, arma::uword, arma::vec, arma::uword, arma::uword, double, double, double, double, double, double, double, double, double, double, double, double, double, arma::vec, arma::mat, arma::mat, arma::mat, double, double, bool)':
mcmcuniepi.cpp:704:48: warning: 'k_us' may be used uninitialized [-Wmaybe-uninitialized]
704 | params_us.rows(arma::span(0, k_us - 1)));
| ^~~~~~~~~~~~~~~~~
mcmcuniepi.cpp:293:17: note: 'k_us' was declared here
293 | arma::uword k_us;
| ^~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c mcmcunireg.cpp -o mcmcunireg.o
mcmcunireg.cpp: In function 'Rcpp::List mcmcunireg_cpp(arma::uword, arma::uword, arma::uword, arma::uword, arma::vec, arma::vec, arma::vec, arma::uvec, arma::uvec, double, double, arma::vec, bool, arma::uword, arma::vec, arma::vec, arma::mat, arma::uword, arma::uword, arma::uword, arma::uword, arma::vec, arma::uvec, arma::vec, arma::vec, arma::uword, arma::uword, double, double, double, double, double, double, double, double, double, double, double, double, arma::mat, double, double, bool, bool)':
mcmcunireg.cpp:459:48: warning: 'k_us' may be used uninitialized [-Wmaybe-uninitialized]
459 | params_us.rows(arma::span(0, k_us - 1)));
| ^~~~~~~~~~~~~~~~~
mcmcunireg.cpp:219:17: note: 'k_us' was declared here
219 | arma::uword k_us;
| ^~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c mixnorm.cpp -o mixnorm.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c mvnorm.cpp -o mvnorm.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rdirichlet.cpp -o rdirichlet.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c sample.cpp -o sample.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c tapply.cpp -o tapply.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c tnorm.cpp -o tnorm.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c var_e_fn.cpp -o var_e_fn.o
g++ -shared -s -static-libgcc -o BayesDecon.dll tmp.def B_basis.o RcppExports.o chk_omp.o formcorr.o mcmcmvt.o mcmcuniepi.o mcmcunireg.o mixnorm.o mvnorm.o rdirichlet.o sample.o tapply.o tnorm.o var_e_fn.o -fopenmp -LD:/RCompile/recent/R-4.4.3/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.4.3/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_01_12_17_46_52_4704/Rtmp4aU8mf/R.INSTALL1883024492b5d/BayesDecon/src'
make[1]: Entering directory '/d/temp/2026_01_12_17_46_52_4704/Rtmp4aU8mf/R.INSTALL1883024492b5d/BayesDecon/src'
make[1]: Leaving directory '/d/temp/2026_01_12_17_46_52_4704/Rtmp4aU8mf/R.INSTALL1883024492b5d/BayesDecon/src'
installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-BayesDecon/00new/BayesDecon/libs/x64
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'BayesDecon' as BayesDecon_0.1.4.zip
* DONE (BayesDecon)