- using R version 4.4.3 (2025-02-28 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 13.3.0
GNU Fortran (GCC) 13.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- using option '--no-vignettes'
- checking for file 'BIOMASS/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'BIOMASS' version '2.2.4'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'BIOMASS' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [9s] OK
- checking whether the package can be loaded with stated dependencies ... [10s] OK
- checking whether the package can be unloaded cleanly ... [10s] OK
- checking whether the namespace can be loaded with stated dependencies ... [9s] OK
- checking whether the namespace can be unloaded cleanly ... [11s] OK
- checking loading without being on the library search path ... [9s] OK
- checking whether startup messages can be suppressed ... [10s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [27s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... [1s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [23s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [33s] ERROR
Running 'testthat.R' [32s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(BIOMASS)
For more information on using BIOMASS, visit https://umr-amap.github.io/BIOMASS
Using temporary cache
It is recommended to use a permanent cache to avoid to re-download files on each session.
See function createCache() or BIOMASS.cache option.
>
> test_check("BIOMASS")
pj_obj_create: Cannot find proj.db
pj_obj_create: Cannot find proj.db
pj_obj_create: Cannot find proj.db
pj_obj_create: Cannot find proj.db
NULL
trying URL 'https://github.com/umr-amap/BIOMASS/raw/master/data-raw/climate_variable/E.zip'
Content type 'application/zip' length 31208287 bytes (29.8 MB)
==================================================
downloaded 29.8 MB
pj_obj_create: Cannot find proj.db
[ FAIL 1 | WARN 0 | SKIP 9 | PASS 452 ]
══ Skipped tests (9) ═══════════════════════════════════════════════════════════
• On CRAN (9): 'test-AGBmonteCarlo.R:153:3', 'test-check_coord_plot.R:106:3',
'test-check_coord_plot.R:131:3', 'test-computeAGB.R:43:3',
'test-correctTaxo.R:5:3', 'test-modelHD.R:120:3', 'test-retrieveH.R:36:3',
'test-small_function.R:22:3', 'test-subplot_summary.R:36:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-small_function.R:42:3'): getBioclimParam ───────────────────────
Error in `methods::as(x, "SpatRaster")`: no method or default for coercing "NULL" to "SpatRaster"
Backtrace:
▆
1. └─BIOMASS::getBioclimParam(coord) at test-small_function.R:42:3
2. ├─terra::rast(cacheManager("bio4.bil"))
3. └─terra::rast(cacheManager("bio4.bil"))
4. └─methods::as(x, "SpatRaster")
[ FAIL 1 | WARN 0 | SKIP 9 | PASS 452 ]
Deleting unused snapshots:
• check_coord_plot/check-plot-201-rast-prop.svg
• check_coord_plot/check-plot-201-trust-f.svg
• check_coord_plot/check-plot-204.svg
• subplot_summary/subplot-summary-multiple-metrics-204.svg
• subplot_summary/subplot-summary-multiple-plot-201.svg
• subplot_summary/subplot-summary-multiple-plot-204.svg
• subplot_summary/subplot-summary-proj-coords.svg
• subplot_summary/subplot-summary-quantile.svg
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking running R code from vignettes ... SKIPPED
- checking re-building of vignette outputs ... SKIPPED
- checking PDF version of manual ... [15s] OK
- checking HTML version of manual ... [8s] OK
- DONE
Status: 1 ERROR