- using R version 3.6.3 (2020-02-29)
- using platform: x86_64-w64-mingw32 (64-bit)
- using session charset: ISO8859-1
- checking for file 'broom/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'broom' version '0.7.3'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'broom' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [12s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking R/sysdata.rda ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... ERROR
Running examples in 'broom-Ex.R' failed
The error most likely occurred in:
> ### Name: glance.speedglm
> ### Title: Glance at a(n) speedglm object
> ### Aliases: glance.speedglm
>
> ### ** Examples
>
>
> library(speedglm)
Loading required package: Matrix
Loading required package: MASS
>
> clotting <- data.frame(
+ u = c(5, 10, 15, 20, 30, 40, 60, 80, 100),
+ lot1 = c(118, 58, 42, 35, 27, 25, 21, 19, 18)
+ )
>
> fit <- speedglm(lot1 ~ log(u), data = clotting, family = Gamma(log))
>
> tidy(fit)
Error: Assigned data `as.numeric(levels(ret$p.value))[ret$p.value]` must be compatible with existing data.
x Existing data has 2 rows.
x Assigned data has 0 rows.
i Only vectors of size 1 are recycled.
Backtrace:
x
1. +-generics::tidy(fit)
2. +-broom:::tidy.speedglm(fit)
3. | +-base::`$<-`(`*tmp*`, "p.value", value = numeric(0))
4. | \-tibble:::`$<-.tbl_df`(`*tmp*`, "p.value", value = numeric(0))
5. | \-tibble:::tbl_subassign(...)
6. | \-tibble:::vectbl_recycle_rhs(...)
7. | +-base::withCallingHandlers(...)
8. | \-vctrs::vec_recycle(value[[j]], nrow)
9. +-vctrs:::stop_recycle_incompatible_size(...)
10. | \-vctrs:::stop_vctrs(...)
11. | \-rlang::abort(message, class = c(class, "vctrs_error"), ...)
12. | \-rlang:::signal_abort(cnd)
13. | \-base::signalCondition(cnd)
14. \-(function (cnd) ...
Execution halted
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [10s] OK
Running 'spelling.R' [0s]
Running 'test-all.R' [10s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in 'inst/doc' ... OK
- checking re-building of vignette outputs ... [11s] OK
- checking PDF version of manual ... OK
- DONE
Status: 1 ERROR