- using R version 4.1.3 (2022-03-10)
- using platform: x86_64-w64-mingw32 (64-bit)
- using session charset: ISO8859-1
- checking for file 'VAJointSurv/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'VAJointSurv' version '0.1.0'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'VAJointSurv' can be installed ... OK
- checking installed package size ... NOTE
installed size is 7.4Mb
sub-directories of 1Mb or more:
doc 2.2Mb
libs 5.0Mb
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
** checking use of S3 registration ... OK
- loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
** checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [12s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compiled code ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ...
** running examples for arch 'i386' ... [33s] OK
** running examples for arch 'x64' ... [31s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ...
** running tests for arch 'i386' ... [20s] ERROR
Running 'testthat.R' [20s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(VAJointSurv)
Loading required package: survival
>
> options(testthat.progress.max_fails = 1000)
> test_check("VAJointSurv")
[ FAIL 0 | WARN 0 | SKIP 3 | PASS 6094 ]
== Skipped tests ===============================================================
* On CRAN (3)
[ FAIL 0 | WARN 0 | SKIP 3 | PASS 6094 ]
>
> proc.time()
user system elapsed
19.82 0.28 20.06
Error: bad value
Execution halted
** running tests for arch 'x64' ... [20s] OK
Running 'testthat.R' [20s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in 'inst/doc' ... OK
- checking re-building of vignette outputs ... [1s] OK
- checking PDF version of manual ... OK
- DONE
Status: 1 ERROR, 1 NOTE