- using R version 4.1.3 (2022-03-10)
- using platform: x86_64-w64-mingw32 (64-bit)
- using session charset: ISO8859-1
- checking for file 'IsoMemo/DESCRIPTION' ... OK
- this is package 'IsoMemo' version '1.0.6'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'IsoMemo' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [3s] OK
- checking Rd files ... [0s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [1s] ERROR
Running examples in 'IsoMemo-Ex.R' failed
The error most likely occurred in:
> ### Name: getData
> ### Title: API wrapper that fetches data from IsoMemo Applications
> ### Aliases: getData
>
> ### ** Examples
>
> getData(db = "IntChron")
Warning in open.connection(con, "rb") :
InternetOpenUrl failed: 'Die Serververbindung konnte nicht hergestellt werden.'
Error in open.connection(con, "rb") : cannot open the connection
Calls: getData ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection
Execution halted
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [2s] ERROR
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(IsoMemo)
>
> test_check("IsoMemo")
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ]
== Failed tests ================================================================
-- Error ('test-01-getData.R:2:3'): getData() actually retrieves all data ------
Error in `open.connection(con, "rb")`: cannot open the connection
Backtrace:
x
1. \-IsoMemo::getData() at test-01-getData.R:2:2
2. \-IsoMemo::getDatabaseList()
3. \-IsoMemo:::callAPI("dbsources")
4. \-jsonlite::fromJSON(url)
5. \-jsonlite:::parse_and_simplify(...)
6. \-jsonlite:::parseJSON(txt, bigint_as_char)
7. \-jsonlite:::parse_con(txt, bigint_as_char)
8. +-base::open(con, "rb")
9. \-base::open.connection(con, "rb")
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in 'inst/doc' ... OK
- checking re-building of vignette outputs ... [3s] WARNING
Error(s) in re-building vignettes:
--- re-building 'Using-IsoMemo-API.Rmd' using rmarkdown
Quitting from lines 21-23 (Using-IsoMemo-API.Rmd)
Error: processing vignette 'Using-IsoMemo-API.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building 'Using-IsoMemo-API.Rmd'
SUMMARY: processing the following file failed:
'Using-IsoMemo-API.Rmd'
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... OK
- DONE
Status: 2 ERRORs, 1 WARNING