- using R version 3.6.0 beta (2019-04-15 r76395)
- using platform: x86_64-apple-darwin15.6.0 (64-bit)
- using session charset: UTF-8
- checking for file ‘spacejam/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘spacejam’ version ‘1.1’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘spacejam’ can be installed ... [11s/17s] OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking dependencies in R code ... NOTE
'library' or 'require' call to ‘Matrix’ which was already attached by Depends.
Please remove these calls from your code.
Packages in Depends field not imported from:
‘Matrix’ ‘igraph’ ‘splines’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [7s/11s] NOTE
SJ: no visible binding for global variable ‘bs’
SJ: no visible global function definition for ‘get.adjacency’
SJ : <anonymous>: no visible global function definition for
‘graph.adjacency’
SJ: no visible binding for global variable ‘ecount’
SJ.dag: no visible binding for global variable ‘bs’
SJ.dag : <anonymous>: no visible global function definition for
‘graph.adjacency’
SJ.dag: no visible binding for global variable ‘ecount’
SJpath: no visible global function definition for ‘get.adjacency’
SJpath : <anonymous>: no visible global function definition for
‘graph.adjacency’
generate.dag.data: no visible global function definition for ‘vcount’
generate.dag.data: no visible global function definition for
‘topological.sort’
generate.dag.data: no visible global function definition for
‘neighbors’
generate.dag.data: no visible global function definition for ‘rnorm’
generate.dag.data: no visible global function definition for ‘runif’
grpsel: no visible global function definition for ‘Matrix’
moralize: no visible global function definition for ‘vcount’
moralize: no visible global function definition for ‘as.undirected’
moralize: no visible global function definition for ‘get.adjacency’
moralize: no visible global function definition for ‘add.edges’
moralize: no visible global function definition for ‘combn’
moralize: no visible global function definition for ‘simplify’
plot.SJ: no visible global function definition for
‘layout.fruchterman.reingold’
plot.SJ: no visible global function definition for ‘plot’
plot.SJ.dag: no visible global function definition for
‘layout.fruchterman.reingold’
plot.SJ.dag: no visible global function definition for ‘plot’
print.SJ: no visible binding for global variable ‘ecount’
print.SJ: no visible global function definition for ‘ecount’
print.SJ.dag: no visible binding for global variable ‘ecount’
print.SJ.dag: no visible global function definition for ‘ecount’
rdag: no visible global function definition for ‘graph.adjacency’
Undefined global functions or variables:
Matrix add.edges as.undirected bs combn ecount get.adjacency
graph.adjacency layout.fruchterman.reingold neighbors plot rnorm
runif simplify topological.sort vcount
Consider adding
importFrom("graphics", "plot")
importFrom("stats", "rnorm", "runif")
importFrom("utils", "combn")
to your NAMESPACE file.
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking compiled code ... OK
- checking examples ... [38s/72s] OK
- checking PDF version of manual ... OK
- DONE
Status: 3 NOTEs