- using R version 3.6.2 (2019-12-12)
- using platform: x86_64-apple-darwin15.6.0 (64-bit)
- using session charset: UTF-8
- checking for file ‘sos4R/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘sos4R’ version ‘0.4.2’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘sos4R’ can be installed ... [18s/18s] OK
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [17s/17s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [2s/2s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [34s/34s] OK
Running ‘testthat.R’ [34s/34s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [2s/2s] NONE
‘sos4R-vignette-02-ogc-sos.Rmd’using ‘UTF-8’... [0s/0s] OK
‘sos4R-vignette-03-sos-operations.Rmd’using ‘UTF-8’... [0s/0s] OK
‘sos4R-vignette-04-extensions.Rmd’using ‘UTF-8’... [0s/0s] OK
‘sos4R-vignette-05-wrapper-functions.Rmd’using ‘UTF-8’... [0s/0s] OK
‘sos4R.Rmd’using ‘UTF-8’... [0s/0s] OK
- checking re-building of vignette outputs ... [522s/597s] WARNING
Error(s) in re-building vignettes:
--- re-building ‘sos4R-vignette-02-ogc-sos.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
--- finished re-building ‘sos4R-vignette-02-ogc-sos.Rmd’
--- re-building ‘sos4R-vignette-03-sos-operations.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
--- finished re-building ‘sos4R-vignette-03-sos-operations.Rmd’
--- re-building ‘sos4R-vignette-04-extensions.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
--- finished re-building ‘sos4R-vignette-04-extensions.Rmd’
--- re-building ‘sos4R-vignette-05-wrapper-functions.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Quitting from lines 161-164 (sos4R-vignette-05-wrapper-functions.Rmd)
Error: processing vignette 'sos4R-vignette-05-wrapper-functions.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building ‘sos4R-vignette-05-wrapper-functions.Rmd’
--- re-building ‘sos4R.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Quitting from lines 186-193 (sos4R.Rmd)
Error: processing vignette 'sos4R.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building ‘sos4R.Rmd’
SUMMARY: processing the following files failed:
‘sos4R-vignette-05-wrapper-functions.Rmd’ ‘sos4R.Rmd’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... OK
- DONE
Status: 1 WARNING