• using R version 4.1.0 (2021-05-18)
  • using platform: x86_64-apple-darwin17.0 (64-bit)
  • using session charset: UTF-8
  • checking for file ‘trajectories/DESCRIPTION’ ... OK
  • this is package ‘trajectories’ version ‘0.2-3’
  • checking package namespace information ... OK
  • checking package dependencies ... NOTE
    Package suggested but not available for checking: ‘taxidata’
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘trajectories’ can be installed ... [7s/10s] OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking ‘build’ directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... [6s/8s] OK
  • checking Rd files ... [1s/1s] OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking sizes of PDF files under ‘inst/doc’ ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking files in ‘vignettes’ ... OK
  • checking examples ... [27s/37s] OK
  • checking for unstated dependencies in ‘tests’ ... OK
  • checking tests ... [4s/6s] OK
      Running ‘tracks.R’ [4s/5s]
      Comparing ‘tracks.Rout’ to ‘tracks.Rout.save’ ...10c10
    < rgdal: version: 1.5-23, (SVN revision 1121)
    ---
    > rgdal: version: 1.3-3, (SVN revision 759)
    12,13c12,13
    < Loaded GDAL runtime: GDAL 3.2.1, released 2020/12/29
    < Path to GDAL shared files: /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rgdal/gdal
    ---
    > Loaded GDAL runtime: GDAL 2.2.3, released 2017/11/20
    > Path to GDAL shared files: /usr/share/gdal/2.2
    15,21c15,17
    < Loaded PROJ runtime: Rel. 7.2.1, January 1st, 2021, [PJ_VERSION: 721]
    < Path to PROJ shared files: /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rgdal/proj
    < PROJ CDN enabled: FALSE
    < Linking to sp version:1.4-5
    < To mute warnings of possible GDAL/OSR exportToProj4() degradation,
    < use options("rgdal_show_exportToProj4_warnings"="none") before loading rgdal.
    < Overwritten PROJ_LIB was /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rgdal/proj
    ---
    > Loaded PROJ.4 runtime: Rel. 4.9.3, 15 August 2016, [PJ_VERSION: 493]
    > Path to PROJ.4 shared files: (autodetected)
    > Linking to sp version: 1.3-1
    38c34
    < > crs = CRS("+proj=longlat +datum=WGS84")
    ---
    > > crs = CRS("+proj=longlat +ellps=WGS84")
    168c164
    < > # stopifnot(all(sapply(all, function(x) proj4string(x) == "+proj=longlat +ellps=WGS84")))
    ---
    > > stopifnot(all(sapply(all, function(x) proj4string(x) == "+proj=longlat +ellps=WGS84")))
    566,573c562,565
    < 1: In .local(x, i, j = j, ..., value) :
    < replacing distance in connections slot
    < 2: In .local(x, i, j = j, ..., value) :
    < replacing distance in connections slot
    < 3: In .local(x, i, j = j, ..., value) :
    < replacing distance in connections slot
    < 4: In .local(x, i, j = j, ..., value) :
    < replacing distance in connections slot
    ---
    > 1: In .local(x, i, j, ..., value) : replacing distance in connections slot
    > 2: In .local(x, i, j, ..., value) : replacing distance in connections slot
    > 3: In .local(x, i, j, ..., value) : replacing distance in connections slot
    > 4: In .local(x, i, j, ..., value) : replacing distance in connections slot
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... [3s/4s] OK
      ‘article.Rnw’... [3s/4s] OK
  • checking re-building of vignette outputs ... [16s/21s] OK
  • checking PDF version of manual ... OK
  • DONE
    Status: 1 NOTE
  • using check arguments '--no-clean-on-error '