- using R version 4.1.0 (2021-05-18)
- using platform: x86_64-apple-darwin17.0 (64-bit)
- using session charset: UTF-8
- checking for file ‘trajectories/DESCRIPTION’ ... OK
- this is package ‘trajectories’ version ‘0.2-3’
- checking package namespace information ... OK
- checking package dependencies ... NOTE
Package suggested but not available for checking: ‘taxidata’
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘trajectories’ can be installed ... [7s/10s] OK
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [6s/8s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [27s/37s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [4s/6s] OK
Running ‘tracks.R’ [4s/5s]
Comparing ‘tracks.Rout’ to ‘tracks.Rout.save’ ...10c10
< rgdal: version: 1.5-23, (SVN revision 1121)
---
> rgdal: version: 1.3-3, (SVN revision 759)
12,13c12,13
< Loaded GDAL runtime: GDAL 3.2.1, released 2020/12/29
< Path to GDAL shared files: /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rgdal/gdal
---
> Loaded GDAL runtime: GDAL 2.2.3, released 2017/11/20
> Path to GDAL shared files: /usr/share/gdal/2.2
15,21c15,17
< Loaded PROJ runtime: Rel. 7.2.1, January 1st, 2021, [PJ_VERSION: 721]
< Path to PROJ shared files: /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rgdal/proj
< PROJ CDN enabled: FALSE
< Linking to sp version:1.4-5
< To mute warnings of possible GDAL/OSR exportToProj4() degradation,
< use options("rgdal_show_exportToProj4_warnings"="none") before loading rgdal.
< Overwritten PROJ_LIB was /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.1/rgdal/proj
---
> Loaded PROJ.4 runtime: Rel. 4.9.3, 15 August 2016, [PJ_VERSION: 493]
> Path to PROJ.4 shared files: (autodetected)
> Linking to sp version: 1.3-1
38c34
< > crs = CRS("+proj=longlat +datum=WGS84")
---
> > crs = CRS("+proj=longlat +ellps=WGS84")
168c164
< > # stopifnot(all(sapply(all, function(x) proj4string(x) == "+proj=longlat +ellps=WGS84")))
---
> > stopifnot(all(sapply(all, function(x) proj4string(x) == "+proj=longlat +ellps=WGS84")))
566,573c562,565
< 1: In .local(x, i, j = j, ..., value) :
< replacing distance in connections slot
< 2: In .local(x, i, j = j, ..., value) :
< replacing distance in connections slot
< 3: In .local(x, i, j = j, ..., value) :
< replacing distance in connections slot
< 4: In .local(x, i, j = j, ..., value) :
< replacing distance in connections slot
---
> 1: In .local(x, i, j, ..., value) : replacing distance in connections slot
> 2: In .local(x, i, j, ..., value) : replacing distance in connections slot
> 3: In .local(x, i, j, ..., value) : replacing distance in connections slot
> 4: In .local(x, i, j, ..., value) : replacing distance in connections slot
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [3s/4s] OK
‘article.Rnw’... [3s/4s] OK
- checking re-building of vignette outputs ... [16s/21s] OK
- checking PDF version of manual ... OK
- DONE
Status: 1 NOTE
- using check arguments '--no-clean-on-error '