Install log for 'rEDM'

* installing *source* package ‘rEDM’ ...
** package ‘rEDM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using C++17
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c CCM.cpp -o CCM.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c ComputeError.cpp -o ComputeError.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c DataFrame.cpp -o DataFrame.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c Embed.cpp -o Embed.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c EmbedDim.cpp -o EmbedDim.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c Multiview.cpp -o Multiview.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c ParameterList.cpp -o ParameterList.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c PredictInterval.cpp -o PredictInterval.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c PredictNL.cpp -o PredictNL.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c RcppEDMCommon.cpp -o RcppEDMCommon.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c SMap.cpp -o SMap.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I ./cppEDM/src/ -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppThread/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c Simplex.cpp -o Simplex.o
rm -f API.o CCM.o Common.o DateTime.o EDM.o EDM_Formatting.o EDM_Neighbors.o Eval.o Multiview.o Parameter.o Simplex.o SMap.o libEDM.a
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c API.cc
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c CCM.cc
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c Common.cc
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c DateTime.cc
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c EDM.cc
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c EDM_Formatting.cc
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c EDM_Neighbors.cc
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c Eval.cc
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c Multiview.cc
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c Parameter.cc
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c Simplex.cc
clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2  -fPIC -DCCM_THREADED -DUSING_R -c SMap.cc
ar -rcs libEDM.a API.o CCM.o Common.o DateTime.o EDM.o EDM_Formatting.o EDM_Neighbors.o Eval.o Multiview.o Parameter.o Simplex.o SMap.o # AR passed from Makevars
cp libEDM.a ../lib/
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o rEDM.so CCM.o ComputeError.o DataFrame.o Embed.o EmbedDim.o Multiview.o ParameterList.o PredictInterval.o PredictNL.o RcppEDMCommon.o RcppExports.o SMap.o Simplex.o -L ./cppEDM/lib/ -lEDM -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/rEDM.Rcheck/00LOCK-rEDM/00new/rEDM/libs
** generating debug symbols (dSYM)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rEDM)