• using R version 4.2.0 (2022-04-22)
  • using platform: x86_64-apple-darwin17.0 (64-bit)
  • using session charset: UTF-8
  • checking for file ‘qtlDesign/DESCRIPTION’ ... OK
  • this is package ‘qtlDesign’ version ‘0.941’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘qtlDesign’ can be installed ... [2s/2s] OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... NOTE
    Malformed Description field: should contain one or more complete sentences.
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... [2s/2s] NOTE
    ci.length: no visible global function definition for ‘qexp’
    detectable.bc: no visible global function definition for ‘uniroot’
    detectable.f2: no visible global function definition for ‘uniroot’
    detectable.ri: no visible global function definition for ‘uniroot’
    nu: no visible global function definition for ‘pnorm’
    nullinfo: no visible global function definition for ‘qnorm’
    nullinfo: no visible global function definition for ‘dnorm’
    optselection.bc: no visible global function definition for ‘optimize’
    optselection.f2: no visible global function definition for ‘optimize’
    optspacing.bc: no visible global function definition for ‘optim’
    optspacing.bc: no visible global function definition for ‘optimize’
    optspacing.f2: no visible global function definition for ‘optim’
    optspacing.f2: no visible global function definition for ‘optimize’
    powercalc.bc: no visible global function definition for ‘pchisq’
    powercalc.f2: no visible global function definition for ‘pchisq’
    samplesize.bc: no visible global function definition for ‘uniroot’
    samplesize.f2: no visible global function definition for ‘uniroot’
    samplesize.ri: no visible global function definition for ‘uniroot’
    tailprob: no visible global function definition for ‘pchisq’
    thresh: no visible global function definition for ‘uniroot’
    Undefined global functions or variables:
      dnorm optim optimize pchisq pnorm qexp qnorm uniroot
    Consider adding
      importFrom("stats", "dnorm", "optim", "optimize", "pchisq", "pnorm",
                 "qexp", "qnorm", "uniroot")
    to your NAMESPACE file.
  • checking Rd files ... [0s/0s] OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking examples ... [0s/0s] OK
  • checking PDF version of manual ... OK
  • DONE
    Status: 2 NOTEs
  • using check arguments '--no-clean-on-error '