• using R version 4.4.1 (2024-06-14)
• using platform: x86_64-apple-darwin20
• R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 12.2.0
• running under: macOS Ventura 13.3.1
• using session charset: UTF-8
• checking for file ‘mapi/DESCRIPTION’ ... OK
• this is package ‘mapi’ version ‘1.1.3’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘mapi’ can be installed ... [9s/11s] OK See the install log for details.
• used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
• used SDK: ‘MacOSX11.3.sdk’
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [3s/3s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking compiled code ... OK
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [60s/83s] ERROR   Running ‘testthat.R’ [60s/83s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > # This file is part of the standard setup for testthat.   > # It is recommended that you do not modify it.   > #   > # Where should you do additional test configuration?   > # Learn more about the roles of various files in:   > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview   > # * https://testthat.r-lib.org/articles/special-files.html   >   > library(testthat)   > library(mapi)   >   > test_check("mapi")   Checking data...   `metric` provided as a vector   Unique names ... OK   All samples used in metric ... OK   ... 200 samples and 39800 metric left.   Estimated halfwidth: 286.835888   Estimated halfwidth: 143.417944   Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE   Building local cartesian grid...   ... 1071 cells   Building worldwide lat/lon grid...   Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084   ... 2432 cells   Building local cartesian grid...   ... 1071 cells   MAPI COMPUTATION STARTED   Checking data...   `metric` provided as a vector   Unique names ... OK   All samples used in metric ... OK   ... 200 samples and 39800 metric left.   Building 20100 elliptical polygons...   ... 20100 ellipses. [user: 1.492, system: 0.041, elapsed: 1.593 seconds]   Computing spatial intersection between 1071 grid cells and 20100 ellipses...   ... done. [user: 8.451, system: 0.063, elapsed: 8.976 seconds]   Building sample pairs...   ... 39800 sample pairs. [user: 0.173, system: 0.012, elapsed: 0.193 seconds]   Matching grid cells with sample pairs...   ... 2295394 matches found. [user: 3.294, system: 0.162, elapsed: 3.502 seconds]   Computing values for grid cells...   ... done. [user: 0.151, system: 0.004, elapsed: 0.163 seconds]   MAPI COMPUTATION ENDED. [TOTAL: user: 14.074, system: 0.302, elapsed: 15.000 seconds]   MAPI COMPUTATION STARTED   Checking data...   `metric` provided as a vector   Unique names ... OK   All samples used in metric ... OK   ... 200 samples and 39800 metric left.   Building 20100 elliptical polygons...   ... 20100 ellipses. [user: 1.454, system: 0.031, elapsed: 1.784 seconds]   Computing spatial intersection between 1071 grid cells and 20100 ellipses...   ... done. [user: 9.013, system: 0.086, elapsed: 14.917 seconds]   Building sample pairs...   ... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.257 seconds]   Matching grid cells with sample pairs...   ... 2295394 matches found. [user: 3.548, system: 0.177, elapsed: 5.704 seconds]   Computing values for grid cells...   ... done. [user: 0.158, system: 0.004, elapsed: 0.260 seconds]   MAPI COMPUTATION ENDED. [TOTAL: user: 14.904, system: 0.328, elapsed: 23.674 seconds]   Building local cartesian grid...   ... 1071 cells   MAPI COMPUTATION STARTED   Checking data...   `metric` provided as a vector   Unique names ... OK   All samples used in metric ... OK   ... 200 samples and 39800 metric left.   Building 20100 elliptical polygons...   ... 20100 ellipses. [user: 1.569, system: 0.035, elapsed: 2.917 seconds]   Computing spatial intersection between 1071 grid cells and 20100 ellipses...   ... done. [user: 8.870, system: 0.048, elapsed: 14.219 seconds]   Building sample pairs...   ... 39800 sample pairs. [user: 0.179, system: 0.011, elapsed: 0.266 seconds]   Matching grid cells with sample pairs...   ... 2295394 matches found. [user: 3.416, system: 0.159, elapsed: 5.056 seconds]   Computing values for grid cells...   ... done. [user: 0.153, system: 0.002, elapsed: 0.221 seconds]   Starting 50 permutations...   ... serially ...        |     | | 0%     |     |== | 2%     |     |=== | 4%     |     |===== | 6%     |     |====== | 8%     |     |======== | 10%     |     |========== | 12%     |     |=========== | 14%     |     |============= | 16%     |     |============== | 18%     |     |================ | 20%     |     |================== | 22%     |     |=================== | 24%     |     |===================== | 26%     |     |====================== | 28%     |     |======================== | 30%     |     |========================== | 32%     |     |=========================== | 34%     |     |============================= | 36%     |     |============================== | 38%     |     |================================ | 40%     |     |================================== | 42%     |     |=================================== | 44%     |     |===================================== | 46%     |     |====================================== | 48%     |     |======================================== | 50%     |     |========================================== | 52%     |     |=========================================== | 54%     |     |============================================= | 56%     |     |============================================== | 58%     |     |================================================ | 60%     |     |================================================== | 62%     |     |=================================================== | 64%     |     |===================================================== | 66%     |     |====================================================== | 68%     |     |======================================================== | 70%     |     |========================================================== | 72%     |     |=========================================================== | 74%     |     |============================================================= | 76%     |     |============================================================== | 78%     |     |================================================================ | 80%     |     |================================================================== | 82%     |     |=================================================================== | 84%     |     |===================================================================== | 86%     |     |====================================================================== | 88%     |     |======================================================================== | 90%     |     |========================================================================== | 92%     |     |=========================================================================== | 94%     |     |============================================================================= | 96%     |     |============================================================================== | 98%     |     |================================================================================| 100%   ... computing probabilities from permuted values ...   ... done. [user: 9.913, system: 0.439, elapsed: 14.736 seconds]   MAPI COMPUTATION ENDED. [TOTAL: user: 24.716, system: 0.716, elapsed: 38.404 seconds]   Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...   ... 1 upper-tail and 3 lower-tail significant areas returned   Building local cartesian grid...   ... 1045 cells   [ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────   sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).        `actual`: 963429.6   `expected`: 963339.6      [ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]   Error: Test failures   Execution halted
• checking PDF version of manual ... [11s/14s] OK
• DONE Status: 1 ERROR
• using check arguments '--no-clean-on-error '