• using R version 4.1.0 (2021-05-18)
  • using platform: x86_64-apple-darwin17.0 (64-bit)
  • using session charset: UTF-8
  • checking for file ‘lassoscore/DESCRIPTION’ ... OK
  • this is package ‘lassoscore’ version ‘0.6’
  • checking package namespace information ... OK
  • checking package dependencies ... NOTE
    Package suggested but not available for checking: ‘covTest’
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘lassoscore’ can be installed ... [5s/5s] OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... [4s/4s] NOTE
    glassoscore: no visible global function definition for ‘var’
    glassoscore: no visible global function definition for ‘pchisq’
    lassoscore: no visible global function definition for ‘txtProgressBar’
    lassoscore: no visible global function definition for
      ‘setTxtProgressBar’
    lassoscore: no visible global function definition for ‘pchisq’
    plot.glassoscore: no visible global function definition for ‘legend’
    plot.lassoscore: no visible global function definition for ‘legend’
    plot.mbscore: no visible global function definition for ‘legend’
    qqpval: no visible global function definition for ‘ppoints’
    qqpval: no visible global function definition for ‘qbeta’
    qqpval: no visible global function definition for ‘points’
    qqpval: no visible global function definition for ‘abline’
    qqpval: no visible global function definition for ‘polygon’
    Undefined global functions or variables:
      abline legend pchisq points polygon ppoints qbeta setTxtProgressBar
      txtProgressBar var
    Consider adding
      importFrom("graphics", "abline", "legend", "points", "polygon")
      importFrom("stats", "pchisq", "ppoints", "qbeta", "var")
      importFrom("utils", "setTxtProgressBar", "txtProgressBar")
    to your NAMESPACE file.
  • checking Rd files ... [0s/0s] OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking LazyData ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking examples ... [3s/3s] OK
  • checking PDF version of manual ... OK
  • DONE
    Status: 2 NOTEs
  • using check arguments '--no-clean-on-error '