• using R version 4.1.0 (2021-05-18)
  • using platform: x86_64-apple-darwin17.0 (64-bit)
  • using session charset: UTF-8
  • checking for file ‘kcirt/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘kcirt’ version ‘0.6.0’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘kcirt’ can be installed ... [2s/3s] OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking ‘build’ directory ... OK
  • checking DESCRIPTION meta-information ... NOTE
    Malformed Description field: should contain one or more complete sentences.
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... [3s/4s] NOTE
    ikcirt.fun.mss.eta: no visible global function definition for ‘var’
    ikcirt.fun.mss.eta: no visible global function definition for ‘pnorm’
    ikcirt.fun.mss.lambda: no visible global function definition for ‘var’
    ikcirt.fun.mss.lambda: no visible global function definition for
      ‘pnorm’
    ikcirt.fun.mss.mu: no visible global function definition for ‘pnorm’
    kcirt.fitEE: no visible binding for global variable ‘sd’
    kcirt.fitEE: no visible global function definition for ‘var’
    kcirt.fitEE: no visible global function definition for ‘cor’
    kcirt.fitMSS: no visible global function definition for ‘var’
    kcirt.fitMSS: no visible global function definition for ‘pnorm’
    kcirt.fitMSS: no visible global function definition for ‘sfInit’
    kcirt.fitMSS: no visible global function definition for ‘sfExport’
    kcirt.fitMSS: no visible global function definition for ‘rnorm’
    kcirt.fitMSS: no visible global function definition for
      ‘txtProgressBar’
    kcirt.fitMSS: no visible global function definition for ‘sfIsRunning’
    kcirt.fitMSS: no visible global function definition for ‘sfStop’
    kcirt.fitMSS: no visible global function definition for ‘cor’
    Undefined global functions or variables:
      cor pnorm rnorm sd sfExport sfInit sfIsRunning sfStop txtProgressBar
      var
    Consider adding
      importFrom("stats", "cor", "pnorm", "rnorm", "sd", "var")
      importFrom("utils", "txtProgressBar")
    to your NAMESPACE file.
  • checking Rd files ... [1s/1s] OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking sizes of PDF files under ‘inst/doc’ ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking files in ‘vignettes’ ... OK
  • checking examples ... [1s/1s] OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... [1s/1s] OK
      ‘kcirt.Snw’... [0s/1s] OK
      ‘kcirtTutorial.Snw’... [0s/1s] OK
  • checking re-building of vignette outputs ... [10s/12s] OK
  • checking PDF version of manual ... OK
  • DONE
    Status: 2 NOTEs
  • using check arguments '--no-clean-on-error '