• using R version 4.3.3 (2024-02-29)
• using platform: x86_64-apple-darwin20 (64-bit)
• R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 12.2.0
• running under: macOS Ventura 13.3.1
• using session charset: UTF-8
• checking for file ‘git2rdata/DESCRIPTION’ ... OK
• this is package ‘git2rdata’ version ‘0.4.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘git2rdata’ can be installed ... [2s/3s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [3s/4s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/4s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [5s/10s] OK   Running ‘testthat.R’ [4s/10s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [8s/18s] ERROR Errors in running code in vignettes: when running code in ‘plain_text.Rmd’   ... > write_vc(x, "custom_na", path, strict = FALSE, na = "X", + optimize = FALSE) Warning: No sorting applied. Sorting is strongly recommended in combination with version control.   When sourcing ‘plain_text.R’: Error: one of the strings matches the NA string ('X') Please use a different NA string or consider using a factor. Execution halted when running code in ‘version_control.Rmd’   ... Add extra sorting variables to ensure small diffs.   When sourcing ‘version_control.R’: Error: The data was not overwritten because of the issues below. See vignette('version_control', package = 'git2rdata') for more information. - The sorting variables changed.     - Sorting for the new data: 'y'.     - Sorting for the old data: . Execution halted   ‘efficiency.Rmd’ using ‘UTF-8’... [4s/7s] OK   ‘metadata.Rmd’ using ‘UTF-8’... [0s/1s] OK   ‘plain_text.Rmd’ using ‘UTF-8’... failed   ‘split_by.Rmd’ using ‘UTF-8’... [2s/4s] OK   ‘version_control.Rmd’ using ‘UTF-8’... failed   ‘workflow.Rmd’ using ‘UTF-8’... [1s/5s] OK
• checking re-building of vignette outputs ... [28s/54s] OK
• checking PDF version of manual ... [6s/13s] OK
• DONE Status: 1 ERROR
• using check arguments '--no-clean-on-error '