* using log directory ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.4/clitable.Rcheck’ * using R version 4.4.1 (2024-06-14) * using platform: x86_64-apple-darwin20 * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Ventura 13.3.1 * using session charset: UTF-8 * checking for file ‘clitable/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘clitable’ version ‘0.1.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘clitable’ can be installed ... [2s/2s] OK See 'https://www.r-project.org/nosvn/R.check/r-oldrel-macos-x86_64/clitable-00install.html' for details. * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking dependencies in R code ... WARNING Missing or unexported object: ‘datasets::penguins’ * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [1s/2s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [0s/1s] ERROR Running examples in ‘clitable-Ex.R’ failed The error most likely occurred in: > ### Name: cli_table > ### Title: generates a text table > ### Aliases: cli_table > > ### ** Examples > > df <- head(datasets::penguins, 20) Error: 'penguins' is not an exported object from 'namespace:datasets' Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [2s/4s] ERROR Running ‘testthat.R’ [1s/3s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > suppressPackageStartupMessages(library(clitable)) > > test_check("clitable") ── clitable border styles ────────────────────────────────────────────────────── ── style: single  ── ┌────────────┬───────────┬────────────┬───────────┬───────┐ │Sepal.Length│Sepal.Width│Petal.Length│Petal.Width│Species│ ├────────────┼───────────┼────────────┼───────────┼───────┤ │ 5.1 │ 3.5 │ 1.4 │ 0.2 │ setosa│ │ 4.9 │ 3.0 │ 1.4 │ 0.2 │ setosa│ │ 4.7 │ 3.2 │ 1.3 │ 0.2 │ setosa│ │ 4.6 │ 3.1 │ 1.5 │ 0.2 │ setosa│ │ 5.0 │ 3.6 │ 1.4 │ 0.2 │ setosa│ │ 5.4 │ 3.9 │ 1.7 │ 0.4 │ setosa│ └────────────┴───────────┴────────────┴───────────┴───────┘ ┌───┬───┬───┬───┬──────┐ │5.1│3.5│1.4│0.2│setosa│ │4.9│3.0│1.4│0.2│setosa│ │4.7│3.2│1.3│0.2│setosa│ │4.6│3.1│1.5│0.2│setosa│ │5.0│3.6│1.4│0.2│setosa│ │5.4│3.9│1.7│0.4│setosa│ └───┴───┴───┴───┴──────┘ ── style: double  ── ╔════════════╦═══════════╦════════════╦═══════════╦═══════╗ ║Sepal.Length║Sepal.Width║Petal.Length║Petal.Width║Species║ ╠════════════╬═══════════╬════════════╬═══════════╬═══════╣ ║ 5.1 ║ 3.5 ║ 1.4 ║ 0.2 ║ setosa║ ║ 4.9 ║ 3.0 ║ 1.4 ║ 0.2 ║ setosa║ ║ 4.7 ║ 3.2 ║ 1.3 ║ 0.2 ║ setosa║ ║ 4.6 ║ 3.1 ║ 1.5 ║ 0.2 ║ setosa║ ║ 5.0 ║ 3.6 ║ 1.4 ║ 0.2 ║ setosa║ ║ 5.4 ║ 3.9 ║ 1.7 ║ 0.4 ║ setosa║ ╚════════════╩═══════════╩════════════╩═══════════╩═══════╝ ╔═══╦═══╦═══╦═══╦══════╗ ║5.1║3.5║1.4║0.2║setosa║ ║4.9║3.0║1.4║0.2║setosa║ ║4.7║3.2║1.3║0.2║setosa║ ║4.6║3.1║1.5║0.2║setosa║ ║5.0║3.6║1.4║0.2║setosa║ ║5.4║3.9║1.7║0.4║setosa║ ╚═══╩═══╩═══╩═══╩══════╝ ── style: single-double  ── ╓────────────╥───────────╥────────────╥───────────╥───────╖ ║Sepal.Length║Sepal.Width║Petal.Length║Petal.Width║Species║ ╟────────────╫───────────╫────────────╫───────────╫───────╢ ║ 5.1 ║ 3.5 ║ 1.4 ║ 0.2 ║ setosa║ ║ 4.9 ║ 3.0 ║ 1.4 ║ 0.2 ║ setosa║ ║ 4.7 ║ 3.2 ║ 1.3 ║ 0.2 ║ setosa║ ║ 4.6 ║ 3.1 ║ 1.5 ║ 0.2 ║ setosa║ ║ 5.0 ║ 3.6 ║ 1.4 ║ 0.2 ║ setosa║ ║ 5.4 ║ 3.9 ║ 1.7 ║ 0.4 ║ setosa║ ╙────────────╨───────────╨────────────╨───────────╨───────╜ ╓───╥───╥───╥───╥──────╖ ║5.1║3.5║1.4║0.2║setosa║ ║4.9║3.0║1.4║0.2║setosa║ ║4.7║3.2║1.3║0.2║setosa║ ║4.6║3.1║1.5║0.2║setosa║ ║5.0║3.6║1.4║0.2║setosa║ ║5.4║3.9║1.7║0.4║setosa║ ╙───╨───╨───╨───╨──────╜ ── style: double-single  ── ╒════════════╤═══════════╤════════════╤═══════════╤═══════╕ │Sepal.Length│Sepal.Width│Petal.Length│Petal.Width│Species│ ╞════════════╪═══════════╪════════════╪═══════════╪═══════╡ │ 5.1 │ 3.5 │ 1.4 │ 0.2 │ setosa│ │ 4.9 │ 3.0 │ 1.4 │ 0.2 │ setosa│ │ 4.7 │ 3.2 │ 1.3 │ 0.2 │ setosa│ │ 4.6 │ 3.1 │ 1.5 │ 0.2 │ setosa│ │ 5.0 │ 3.6 │ 1.4 │ 0.2 │ setosa│ │ 5.4 │ 3.9 │ 1.7 │ 0.4 │ setosa│ ╘════════════╧═══════════╧════════════╧═══════════╧═══════╛ ╒═══╤═══╤═══╤═══╤══════╕ │5.1│3.5│1.4│0.2│setosa│ │4.9│3.0│1.4│0.2│setosa│ │4.7│3.2│1.3│0.2│setosa│ │4.6│3.1│1.5│0.2│setosa│ │5.0│3.6│1.4│0.2│setosa│ │5.4│3.9│1.7│0.4│setosa│ ╘═══╧═══╧═══╧═══╧══════╛ ── style: classic  ── +------------+-----------+------------+-----------+-------+ |Sepal.Length|Sepal.Width|Petal.Length|Petal.Width|Species| +------------+-----------+------------+-----------+-------+ | 5.1 | 3.5 | 1.4 | 0.2 | setosa| | 4.9 | 3.0 | 1.4 | 0.2 | setosa| | 4.7 | 3.2 | 1.3 | 0.2 | setosa| | 4.6 | 3.1 | 1.5 | 0.2 | setosa| | 5.0 | 3.6 | 1.4 | 0.2 | setosa| | 5.4 | 3.9 | 1.7 | 0.4 | setosa| +------------+-----------+------------+-----------+-------+ +---+---+---+---+------+ |5.1|3.5|1.4|0.2|setosa| |4.9|3.0|1.4|0.2|setosa| |4.7|3.2|1.3|0.2|setosa| |4.6|3.1|1.5|0.2|setosa| |5.0|3.6|1.4|0.2|setosa| |5.4|3.9|1.7|0.4|setosa| +---+---+---+---+------+ ── heatmap columns ───────────────────────────────────────────────────────────── ── default heatmap settings ── ┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐ │ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│ ├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤ │ 21 │ 6 │160.0│110│3.90│2.620│16.46│ 0│ 1│ 4 │ 4 │ │ 21 │ 6 │160.0│110│3.90│2.875│17.02│ 0│ 1│ 4 │ 4 │ │22.8│ 4 │108.0│ 93│3.85│2.320│18.61│ 1│ 1│ 4 │ 1 │ │21.4│ 6 │258.0│110│3.08│3.215│19.44│ 1│ 0│ 3 │ 1 │ │18.7│ 8 │360.0│175│3.15│3.440│17.02│ 0│ 0│ 3 │ 2 │ │18.1│ 6 │225.0│105│2.76│3.460│20.22│ 1│ 0│ 3 │ 1 │ │14.3│ 8 │360.0│245│3.21│3.570│15.84│ 0│ 0│ 3 │ 4 │ │24.4│ 4 │146.7│ 62│3.69│3.190│20.00│ 1│ 0│ 4 │ 2 │ │22.8│ 4 │140.8│ 95│3.92│3.150│22.90│ 1│ 0│ 4 │ 2 │ │19.2│ 6 │167.6│123│3.92│3.440│18.30│ 1│ 0│ 4 │ 4 │ └────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘ ── heatmap custom colors ── ┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐ │ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│ ├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤ │ 21 │ 6 │160.0│110│3.90│2.620│16.46│ 0│ 1│ 4 │ 4 │ │ 21 │ 6 │160.0│110│3.90│2.875│17.02│ 0│ 1│ 4 │ 4 │ │22.8│ 4 │108.0│ 93│3.85│2.320│18.61│ 1│ 1│ 4 │ 1 │ │21.4│ 6 │258.0│110│3.08│3.215│19.44│ 1│ 0│ 3 │ 1 │ │18.7│ 8 │360.0│175│3.15│3.440│17.02│ 0│ 0│ 3 │ 2 │ │18.1│ 6 │225.0│105│2.76│3.460│20.22│ 1│ 0│ 3 │ 1 │ │14.3│ 8 │360.0│245│3.21│3.570│15.84│ 0│ 0│ 3 │ 4 │ │24.4│ 4 │146.7│ 62│3.69│3.190│20.00│ 1│ 0│ 4 │ 2 │ │22.8│ 4 │140.8│ 95│3.92│3.150│22.90│ 1│ 0│ 4 │ 2 │ │19.2│ 6 │167.6│123│3.92│3.440│18.30│ 1│ 0│ 4 │ 4 │ └────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘ ── heatmap custom range ── ┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐ │ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│ ├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤ │ 21 │ 6 │160.0│110│3.90│2.620│16.46│ 0│ 1│ 4 │ 4 │ │ 21 │ 6 │160.0│110│3.90│2.875│17.02│ 0│ 1│ 4 │ 4 │ │22.8│ 4 │108.0│ 93│3.85│2.320│18.61│ 1│ 1│ 4 │ 1 │ │21.4│ 6 │258.0│110│3.08│3.215│19.44│ 1│ 0│ 3 │ 1 │ │18.7│ 8 │360.0│175│3.15│3.440│17.02│ 0│ 0│ 3 │ 2 │ │18.1│ 6 │225.0│105│2.76│3.460│20.22│ 1│ 0│ 3 │ 1 │ │14.3│ 8 │360.0│245│3.21│3.570│15.84│ 0│ 0│ 3 │ 4 │ │24.4│ 4 │146.7│ 62│3.69│3.190│20.00│ 1│ 0│ 4 │ 2 │ │22.8│ 4 │140.8│ 95│3.92│3.150│22.90│ 1│ 0│ 4 │ 2 │ │19.2│ 6 │167.6│123│3.92│3.440│18.30│ 1│ 0│ 4 │ 4 │ └────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘ ── hilite rows ───────────────────────────────────────────────────────────────── ┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐ │ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│ ├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤ │ 21 │ 6 │ 160 │110│ 3.9│ 2.62│16.46│ 0│ 1│ 4 │ 4 │ │ 21 │ 6 │ 160 │110│ 3.9│2.875│17.02│ 0│ 1│ 4 │ 4 │ │22.8│ 4 │ 108 │ 93│3.85│ 2.32│18.61│ 1│ 1│ 4 │ 1 │ │21.4│ 6 │ 258 │110│3.08│3.215│19.44│ 1│ 0│ 3 │ 1 │ │18.7│ 8 │ 360 │175│3.15│ 3.44│17.02│ 0│ 0│ 3 │ 2 │ │18.1│ 6 │ 225 │105│2.76│ 3.46│20.22│ 1│ 0│ 3 │ 1 │ │14.3│ 8 │ 360 │245│3.21│ 3.57│15.84│ 0│ 0│ 3 │ 4 │ │24.4│ 4 │146.7│ 62│3.69│ 3.19│ 20 │ 1│ 0│ 4 │ 2 │ │22.8│ 4 │140.8│ 95│3.92│ 3.15│ 22.9│ 1│ 0│ 4 │ 2 │ │19.2│ 6 │167.6│123│3.92│ 3.44│ 18.3│ 1│ 0│ 4 │ 4 │ └────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘ ── combined ──────────────────────────────────────────────────────────────────── ┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐ │ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│ ├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤ │ 21 │ 6 │160.0│110│3.90│2.620│16.46│ 0│ 1│ 4 │ 4 │ │ 21 │ 6 │160.0│110│3.90│2.875│17.02│ 0│ 1│ 4 │ 4 │ │22.8│ 4 │108.0│ 93│3.85│2.320│18.61│ 1│ 1│ 4 │ 1 │ │21.4│ 6 │258.0│110│3.08│3.215│19.44│ 1│ 0│ 3 │ 1 │ │18.7│ 8 │360.0│175│3.15│3.440│17.02│ 0│ 0│ 3 │ 2 │ │18.1│ 6 │225.0│105│2.76│3.460│20.22│ 1│ 0│ 3 │ 1 │ │14.3│ 8 │360.0│245│3.21│3.570│15.84│ 0│ 0│ 3 │ 4 │ │24.4│ 4 │146.7│ 62│3.69│3.190│20.00│ 1│ 0│ 4 │ 2 │ │22.8│ 4 │140.8│ 95│3.92│3.150│22.90│ 1│ 0│ 4 │ 2 │ │19.2│ 6 │167.6│123│3.92│3.440│18.30│ 1│ 0│ 4 │ 4 │ └────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘ ── not all numeric ───────────────────────────────────────────────────────────── [ FAIL 3 | WARN 0 | SKIP 7 | PASS 35 ] ══ Skipped tests (7) ═══════════════════════════════════════════════════════════ • On CRAN (7): 'test-box.R:15:5', 'test-cli_table.R:17:5', 'test-cli_table.R:91:3', 'test-cli_table.R:187:3', 'test-heatmap.R:12:3', 'test-heatmap.R:33:3', 'test-heatmap.R:77:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-cli_table.R:104:3'): to_character_matrix ─────────────────────── Error: 'penguins' is not an exported object from 'namespace:datasets' Backtrace: ▆ 1. └─utils::head(datasets::penguins) at test-cli_table.R:104:3 ── Error ('test-cli_table.R:147:3'): column_widths ───────────────────────────── Error: 'penguins' is not an exported object from 'namespace:datasets' Backtrace: ▆ 1. ├─base::as.matrix(head(datasets::penguins)) at test-cli_table.R:147:3 2. └─utils::head(datasets::penguins) ── Failure ('test-demo.R:5:3'): demo ─────────────────────────────────────────── Expected `demo()` to run without any errors. ℹ Actually got a with text: 'penguins' is not an exported object from 'namespace:datasets' [ FAIL 3 | WARN 0 | SKIP 7 | PASS 35 ] Error: Test failures Execution halted * checking PDF version of manual ... [6s/12s] OK * DONE Status: 2 ERRORs, 1 WARNING * using check arguments '--no-clean-on-error ' * elapsed time (check, wall clock): 0:50