* installing *source* package ‘bnclassify’ ...
** package ‘bnclassify’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/Rcpp/include' -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/Rcpp/include' -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c anb-operate.cpp -o anb-operate.o
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/Rcpp/include' -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c basic-misc.cpp -o basic-misc.o
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/Rcpp/include' -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c basic-probs.cpp -o basic-probs.o
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/Rcpp/include' -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c bh.cpp -o bh.o
bh.cpp:70:12: warning: unused variable 'index' [-Wunused-variable]
  IndexMap index = get(vertex_index, original_graph);
           ^
bh.cpp:198:10: note: in instantiation of function template specialization 'graph2R<boost::filtered_graph<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, boost::property<boost::vertex_index_t, int, boost::property<boost::vertex_name_t, std::__1::basic_string<char>, boost::no_property> >, boost::property<boost::edge_index_t, int, boost::property<boost::edge_weight_t, double, boost::no_property> >, boost::no_property, boost::listS>, boost::keep_all, remove_names<boost::vec_adj_list_vertex_property_map<boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, boost::property<boost::vertex_index_t, int, boost::property<boost::vertex_name_t, std::__1::basic_string<char>, boost::no_property> >, boost::property<boost::edge_index_t, int, boost::property<boost::edge_weight_t, double, boost::no_property> >, boost::no_property, boost::listS>, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, boost::property<boost::vertex_index_t, int, boost::property<boost::vertex_name_t, std::__1::basic_string<char>, boost::no_property> >, boost::property<boost::edge_index_t, int, boost::property<boost::edge_weight_t, double, boost::no_property> >, boost::no_property, boost::listS> *, std::__1::basic_string<char>, std::__1::basic_string<char> &, boost::vertex_name_t> > >, boost::adjacency_list<boost::vecS, boost::vecS, boost::directedS, boost::property<boost::vertex_index_t, int, boost::property<boost::vertex_name_t, std::__1::basic_string<char>, boost::no_property> >, boost::property<boost::edge_index_t, int, boost::property<boost::edge_weight_t, double, boost::no_property> >, boost::no_property, boost::listS> >' requested here
  return graph2R(fg, g);
         ^
bh.cpp:70:12: warning: unused variable 'index' [-Wunused-variable]
  IndexMap index = get(vertex_index, original_graph);
           ^
bh.cpp:216:10: note: in instantiation of function template specialization 'graph2R<boost::filtered_graph<boost::adjacency_list<boost::vecS, boost::vecS, boost::undirectedS, boost::property<boost::vertex_index_t, int, boost::property<boost::vertex_name_t, std::__1::basic_string<char>, boost::no_property> >, boost::property<boost::edge_weight_t, double, boost::no_property>, boost::no_property, boost::listS>, remove_edge_names<boost::vec_adj_list_vertex_property_map<boost::adjacency_list<boost::vecS, boost::vecS, boost::undirectedS, boost::property<boost::vertex_index_t, int, boost::property<boost::vertex_name_t, std::__1::basic_string<char>, boost::no_property> >, boost::property<boost::edge_weight_t, double, boost::no_property>, boost::no_property, boost::listS>, boost::adjacency_list<boost::vecS, boost::vecS, boost::undirectedS, boost::property<boost::vertex_index_t, int, boost::property<boost::vertex_name_t, std::__1::basic_string<char>, boost::no_property> >, boost::property<boost::edge_weight_t, double, boost::no_property>, boost::no_property, boost::listS> *, std::__1::basic_string<char>, std::__1::basic_string<char> &, boost::vertex_name_t>, boost::adjacency_list<boost::vecS, boost::vecS, boost::undirectedS, boost::property<boost::vertex_index_t, int, boost::property<boost::vertex_name_t, std::__1::basic_string<char>, boost::no_property> >, boost::property<boost::edge_weight_t, double, boost::no_property>, boost::no_property, boost::listS> >, boost::keep_all>, boost::adjacency_list<boost::vecS, boost::vecS, boost::undirectedS, boost::property<boost::vertex_index_t, int, boost::property<boost::vertex_name_t, std::__1::basic_string<char>, boost::no_property> >, boost::property<boost::edge_weight_t, double, boost::no_property>, boost::no_property, boost::listS> >' requested here
  return graph2R(fg, g);    
         ^
bh.cpp:70:12: warning: unused variable 'index' [-Wunused-variable]
  IndexMap index = get(vertex_index, original_graph);
           ^
bh.cpp:272:10: note: in instantiation of function template specialization 'graph2R<boost::adjacency_list<boost::vecS, boost::vecS, boost::undirectedS, boost::property<boost::vertex_index_t, int, boost::property<boost::vertex_name_t, std::__1::basic_string<char>, boost::no_property> >, boost::property<boost::edge_weight_t, double, boost::no_property>, boost::no_property, boost::listS>, boost::adjacency_list<boost::vecS, boost::vecS, boost::undirectedS, boost::property<boost::vertex_index_t, int, boost::property<boost::vertex_name_t, std::__1::basic_string<char>, boost::no_property> >, boost::property<boost::edge_weight_t, double, boost::no_property>, boost::no_property, boost::listS> >' requested here
  return graph2R(krusk, krusk);       
         ^
3 warnings generated.
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/Rcpp/include' -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c data.cpp -o data.o
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/Rcpp/include' -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c graph-internal.cpp -o graph-internal.o
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/Rcpp/include' -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c infer-test-wrappers.cpp -o infer-test-wrappers.o
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/Rcpp/include' -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c infer.cpp -o infer.o
In file included from infer.cpp:1:
../inst/include/infer.h:114:15: warning: private field 'cpt' is not used [-Wunused-private-field]
  const CPT & cpt;
              ^
1 warning generated.
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/Rcpp/include' -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c multidim-array.cpp -o multidim-array.o
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/Rcpp/include' -I'/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.2/BH/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c table.cpp -o table.o
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o bnclassify.so RcppExports.o anb-operate.o basic-misc.o basic-probs.o bh.o data.o graph-internal.o infer-test-wrappers.o infer.o multidim-array.o table.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/high-sierra-x86_64/results/4.2/bnclassify.Rcheck/00LOCK-bnclassify/00new/bnclassify/libs
** generating debug symbols (dSYM)
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bnclassify)