- using R version 3.6.0 (2019-04-26)
- using platform: x86_64-apple-darwin15.6.0 (64-bit)
- using session charset: UTF-8
- checking for file ‘aaSEA/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘aaSEA’ version ‘1.1.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘aaSEA’ can be installed ... [10s/10s] OK
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
‘DT’ ‘shinydashboard’
All declared Imports should be used.
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [8s/8s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [8s/8s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... NONE
- checking re-building of vignette outputs ... [5s/5s] WARNING
Error(s) in re-building vignettes:
--- re-building ‘aaSEA_Documentation.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning in RColorBrewer::brewer.pal(N, "Set2") :
n too large, allowed maximum for palette Set2 is 8
Returning the palette you asked for with that many colors
Warning in RColorBrewer::brewer.pal(N, "Set2") :
n too large, allowed maximum for palette Set2 is 8
Returning the palette you asked for with that many colors
Warning in normalizePath(f2) :
path[1]="webshot3f472895632b.png": No such file or directory
Warning in file(con, "rb") :
cannot open file 'webshot3f472895632b.png': No such file or directory
Quitting from lines 90-91 (aaSEA_Documentation.Rmd)
Error: processing vignette 'aaSEA_Documentation.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building ‘aaSEA_Documentation.Rmd’
SUMMARY: processing the following file failed:
‘aaSEA_Documentation.Rmd’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... OK
- DONE
Status: 1 WARNING, 1 NOTE