• using R version 4.2.0 beta (2022-04-07 r82126)
  • using platform: x86_64-apple-darwin17.0 (64-bit)
  • using session charset: UTF-8
  • checking for file ‘Tsphere/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘Tsphere’ version ‘1.0’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘Tsphere’ can be installed ... [10s/10s] OK
    See the install log for details.
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... NOTE
    Malformed Title field: should not end in a period.
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... [7s/8s] NOTE
    covTranspose11: warning in glasso(sc, 2 * rhoc/n, wi.init = gc$wi,
      w.init = gc$w, maxit = maxit.glasso, thr = thr.glasso, penalize.diag
      = pen.diag): partial argument match of 'penalize.diag' to
      'penalize.diagonal'
    covTranspose11: warning in glasso(sr, 2 * rhor/p, wi.init = gr$wi,
      w.init = gr$w, maxit = maxit.glasso, thr = thr.glasso, penalize.diag
      = pen.diag): partial argument match of 'penalize.diag' to
      'penalize.diagonal'
    .help.ESS: no visible global function definition for ‘index.search’
    TransSphere : ttin: no visible global function definition for ‘t.test’
    TransSphere: no visible global function definition for ‘sd’
    TransSphere: no visible global function definition for ‘quantile’
    TransSphere: no visible global function definition for ‘pt’
    Undefined global functions or variables:
      index.search pt quantile sd t.test
    Consider adding
      importFrom("stats", "pt", "quantile", "sd", "t.test")
    to your NAMESPACE file.
  • checking Rd files ... [0s/0s] OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking examples ... [12s/12s] OK
  • checking PDF version of manual ... OK
  • DONE
    Status: 2 NOTEs
  • using check arguments '--no-clean-on-error '