- using R version 4.2.0 (2022-04-22)
- using platform: x86_64-apple-darwin17.0 (64-bit)
- using session charset: UTF-8
- checking for file ‘STAR/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘STAR’ version ‘0.3-7’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘STAR’ can be installed ... [9s/10s] OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking dependencies in R code ... NOTE
'library' or 'require' call to ‘codetools’ which was already attached by Depends.
Please remove these calls from your code.
Packages in Depends field not imported from:
‘codetools’ ‘gss’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [10s/10s] NOTE
as.spikeTrain: no visible global function definition for ‘spikeTimes’
gamObj.gampsth: no visible binding for global variable ‘PoissonF’
gammaMLE: multiple local function definitions for ‘rFct’ with different
formal arguments
gssObj.gsspsth: no visible binding for global variable ‘gfit’
gssObj.gsspsth0: no visible binding for global variable ‘gfit’
gsslockedTrain: no visible global function definition for ‘gssanova’
gsslockedTrain0: no visible global function definition for ‘gssanova0’
gsspsth: no visible global function definition for ‘gssanova’
gsspsth0: no visible global function definition for ‘gssanova0’
invgaussMLE: multiple local function definitions for ‘rFct’ with
different formal arguments
lines.CountingProcessSamplePath: no visible binding for global variable
‘st’
mkAR: no visible binding for global variable ‘lN.1’
mkM2U: no visible global function definition for ‘ssden’
mkM2U : <anonymous>: no visible global function definition for ‘dssden’
mkM2U : dFct: no visible global function definition for ‘dssden’
mkPostSimAnalysis: no visible global function definition for
‘findGlobals’
plot.ssanova: no visible global function definition for ‘X11’
plot.ssanova0: no visible global function definition for ‘X11’
qqDuration: no visible binding for global variable ‘yi’
qqDuration: no visible binding for global variable ‘si’
reportHTML.gam: no visible global function definition for ‘png’
reportHTML.gam: no visible global function definition for ‘dev.off’
reportHTML.repeatedTrain: no visible global function definition for
‘png’
reportHTML.repeatedTrain: no visible global function definition for
‘dev.off’
reportHTML.spikeTrain: no visible global function definition for ‘png’
reportHTML.spikeTrain: no visible global function definition for
‘dev.off’
reportHTML.spikeTrain : <anonymous>: no visible global function
definition for ‘png’
reportHTML.spikeTrain : <anonymous>: no visible global function
definition for ‘dev.off’
thinProcess: no visible binding for global variable ‘targetFct’
thinProcess: no visible binding for global variable ‘posMax’
Undefined global functions or variables:
PoissonF X11 dev.off dssden findGlobals gfit gssanova gssanova0 lN.1
png posMax si spikeTimes ssden st targetFct yi
Consider adding
importFrom("grDevices", "X11", "dev.off", "png")
to your NAMESPACE file.
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [5s/5s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [137s/137s] OK
‘IEwSTARshort.Rnw’... [137s/137s] OK
- checking re-building of vignette outputs ... [144s/145s] OK
- checking PDF version of manual ... OK
- DONE
Status: 2 NOTEs
- using check arguments '--no-clean-on-error '