* installing *source* package ‘QFASA’ ...
** package ‘QFASA’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
#/Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('ErrorModelSimpleEquant.cpp','-O0 -g', safebounds=FALSE,safeunload=FALSE)"
#/Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('CommonDiet.cpp','-O0 -g',safebounds=FALSE,safeunload=FALSE)"
/Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('ErrorModelSimpleEquant.cpp',safebounds=FALSE,safeunload=FALSE)"
/Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('CommonDiet.cpp',safebounds=FALSE,safeunload=FALSE)"
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include" -I"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_CommonDiet -DCPPAD_FRAMEWORK -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c CommonDiet.cpp -o CommonDiet.o
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include" -I"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_ErrorModelSimpleEquant -DCPPAD_FRAMEWORK -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c ErrorModelSimpleEquant.cpp -o ErrorModelSimpleEquant.o
In file included from ErrorModelSimpleEquant.cpp:3:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:87:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
Index count = 0;
^
In file included from ErrorModelSimpleEquant.cpp:3:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:87:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:31:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseLU:33:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
Index nsuper_et = 0; // Number of relaxed snodes in the original etree
^
In file included from CommonDiet.cpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:87:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
Index count = 0;
^
In file included from CommonDiet.cpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:87:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:31:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseLU:33:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
Index nsuper_et = 0; // Number of relaxed snodes in the original etree
^
In file included from ErrorModelSimpleEquant.cpp:3:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:112:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/cppad.hpp:34:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/ode_gear.hpp:489:6: warning: variable 'sign' set but not used [-Wunused-but-set-variable]
int sign;
^
In file included from ErrorModelSimpleEquant.cpp:3:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:112:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/cppad.hpp:39:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/romberg_mul.hpp:277:10: warning: variable 'pow2' set but not used [-Wunused-but-set-variable]
size_t pow2 = 1;
^
In file included from CommonDiet.cpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:112:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/cppad.hpp:34:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/ode_gear.hpp:489:6: warning: variable 'sign' set but not used [-Wunused-but-set-variable]
int sign;
^
In file included from CommonDiet.cpp:7:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:112:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/cppad.hpp:39:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/romberg_mul.hpp:277:10: warning: variable 'pow2' set but not used [-Wunused-but-set-variable]
size_t pow2 = 1;
^
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o CommonDiet.so CommonDiet.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
[1] 0
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o ErrorModelSimpleEquant.so ErrorModelSimpleEquant.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
[1] 0
# Comment here preserves the prior tab
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/QFASA.Rcheck/00LOCK-QFASA/00new/QFASA/libs
** generating debug symbols (dSYM)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (QFASA)