- using R version 4.4.0 (2024-04-24)
- using platform: x86_64-apple-darwin20
- R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
- running under: macOS Ventura 13.3.1
- using session charset: UTF-8
- checking for file ‘Phase12Compare/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘Phase12Compare’ version ‘1.5’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘Phase12Compare’ can be installed ... [22s/17s] OK
See the install log for details.
- used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
- used SDK: ‘MacOSX11.3.sdk’
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [3s/3s] OK
- checking Rd files ... [0s/0s] NOTE
checkRd: (-1) GetEfftoxContour.Rd:37: Lost braces; missing escapes or markup?
37 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:37: Lost braces; missing escapes or markup?
37 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:37: Lost braces; missing escapes or markup?
37 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:37: Lost braces; missing escapes or markup?
37 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:47: Lost braces; missing escapes or markup?
47 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:47: Lost braces; missing escapes or markup?
47 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:47: Lost braces; missing escapes or markup?
47 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:47: Lost braces; missing escapes or markup?
47 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:47: Lost braces; missing escapes or markup?
47 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxContour.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxUt.Rd:47: Lost braces; missing escapes or markup?
47 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxUt.Rd:47: Lost braces; missing escapes or markup?
47 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxUt.Rd:47: Lost braces; missing escapes or markup?
47 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxUt.Rd:47: Lost braces; missing escapes or markup?
47 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxUt.Rd:47: Lost braces; missing escapes or markup?
47 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxUt.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxUt.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxUt.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxUt.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetEfftoxUt.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) GetSpsoContour.Rd:35: Lost braces; missing escapes or markup?
35 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) GetSpsoContour.Rd:35: Lost braces; missing escapes or markup?
35 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) GetSpsoContour.Rd:35: Lost braces; missing escapes or markup?
35 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) GetSpsoContour.Rd:35: Lost braces; missing escapes or markup?
35 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:39: Lost braces; missing escapes or markup?
39 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:39: Lost braces; missing escapes or markup?
39 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:39: Lost braces; missing escapes or markup?
39 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:39: Lost braces; missing escapes or markup?
39 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:51: Lost braces; missing escapes or markup?
51 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:51: Lost braces; missing escapes or markup?
51 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:51: Lost braces; missing escapes or markup?
51 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:51: Lost braces; missing escapes or markup?
51 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxContour.Rd:51: Lost braces; missing escapes or markup?
51 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxUt.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxUt.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxUt.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxUt.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxUt.Rd:49: Lost braces; missing escapes or markup?
49 | \item{HypermeansEFF}{Hypermeans for the Efftox model. In order, entries are hypermeans for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxUt.Rd:51: Lost braces; missing escapes or markup?
51 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxUt.Rd:51: Lost braces; missing escapes or markup?
51 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxUt.Rd:51: Lost braces; missing escapes or markup?
51 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxUt.Rd:51: Lost braces; missing escapes or markup?
51 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimEfftoxUt.Rd:51: Lost braces; missing escapes or markup?
51 | \item{HypervarsEFF}{Hypervariances for the Efftox model. In order, entries are hypervariances for (beta_{0,E},beta_{1,E},beta_{2,E},beta_{0,T},beta_{1,T},psi).}
| ^
checkRd: (-1) SimSpsoContour.Rd:37: Lost braces; missing escapes or markup?
37 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) SimSpsoContour.Rd:37: Lost braces; missing escapes or markup?
37 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) SimSpsoContour.Rd:37: Lost braces; missing escapes or markup?
37 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
checkRd: (-1) SimSpsoContour.Rd:37: Lost braces; missing escapes or markup?
37 | \item{Contour}{Contour vector for desirability function. Contains in order: (pi_{1,E},pi_{2,T},pi_{3,E},pi_{4,T}).}
| ^
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking compiled code ... OK
- checking examples ... [3s/3s] OK
- checking PDF version of manual ... [6s/6s] OK
- DONE
Status: 1 NOTE
- using check arguments '--no-clean-on-error '