• using R version 3.6.0 beta (2019-04-15 r76395)
• using platform: x86_64-apple-darwin15.6.0 (64-bit)
• using session charset: UTF-8
• checking for file ‘GAMBoost/DESCRIPTION’ ... OK
• this is package ‘GAMBoost’ version ‘1.2-3’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘GAMBoost’ can be installed ... [11s/22s] OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... NOTE
  Malformed Description field: should contain one or more complete sentences.
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking dependencies in R code ... NOTE
  'library' or 'require' calls in package code:
    ‘parallel’ ‘snowfall’
    Please use :: or requireNamespace() instead.
    See section 'Suggested packages' in the 'Writing R Extensions' manual.
  Package in Depends field not imported from: ‘Matrix’
    These packages need to be imported from (in the NAMESPACE file)
    for when this namespace is loaded but not attached.
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... NOTE
  Calls with DUP:
     .C("get_min_score_dev_binary_index", x.linear, as.integer(length(y)),
         as.integer(componentwise.no), as.integer(nrow(x.linear)),
         subset.index, linpen.index, as.double(y), as.double(actual.mu),
         as.double(actual.eta), as.double(D), as.double(weights),
         double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
         double(componentwise.no), index = integer(1), score = double(componentwise.no),
         dev = double(1), DUP = FALSE)
     .C("calc_dev_binary_index", x.linear, as.integer(length(y)),
         as.integer(componentwise.no), as.integer(nrow(x.linear)),
         subset.index, linpen.index, as.double(y), as.double(actual.mu),
         as.double(actual.eta), as.double(D), as.double(weights),
         double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
         double(componentwise.no), double(componentwise.no), res = double(componentwise.no),
         DUP = FALSE)
     .C("pre_sum_index", x.linear, as.integer(length(D)), as.integer(componentwise.no),
         as.integer(nrow(x.linear)), subset.index, linpen.index, as.double(D),
         as.double(weights), res = double(componentwise.no), DUP = FALSE)
     .C("get_min_score_dev_gaussian_index", x.linear, as.integer(length(y)),
         as.integer(componentwise.no), as.integer(nrow(x.linear)),
         subset.index, linpen.index, as.double(y), as.double(actual.mu),
         as.double(actual.eta), as.double(D), as.double(weights),
         double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
         pre.sum, index = integer(1), score = double(componentwise.no),
         dev = double(1), DUP = FALSE)
     .C("get_min_score_dev_general_index", x.linear, as.integer(length(y)),
         as.integer(componentwise.no), as.integer(nrow(x.linear)),
         subset.index, linpen.index, as.double(y), as.double(actual.mu),
         as.double(actual.eta), as.double(D), as.double(weights),
         double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
         double(componentwise.no), index = integer(1), score = double(componentwise.no),
         beta.delta = double(1), DUP = FALSE)
  DUP is no longer supported and will be ignored.
• checking R code for possible problems ... [8s/18s] NOTE
  GAMBoost: no visible global function definition for ‘binomial’
  GAMBoost: no visible global function definition for ‘gaussian’
  GAMBoost: no visible global function definition for ‘poisson’
  GAMBoost: no visible binding for global variable ‘sd’
  GAMBoost: no visible global function definition for ‘Matrix’
  calc.confidence.bands: no visible global function definition for
    ‘predict’
  cv.GAMBoost: no visible global function definition for ‘binomial’
  cv.GAMBoost : eval.fold: no visible global function definition for
    ‘predict’
  cv.GAMBoost: no visible global function definition for ‘mclapply’
  cv.GAMBoost: no visible binding for global variable ‘var’
  estimPVal: no visible global function definition for ‘mclapply’
  plot.GAMBoost: no visible global function definition for ‘plot’
  plot.GAMBoost: no visible global function definition for ‘lines’
  Undefined global functions or variables:
    Matrix binomial gaussian lines mclapply plot poisson predict sd var
  Consider adding
    importFrom("graphics", "lines", "plot")
    importFrom("stats", "binomial", "gaussian", "poisson", "predict", "sd",
               "var")
  to your NAMESPACE file.
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking compiled code ... OK
• checking examples ... [13s/29s] OK
• checking PDF version of manual ... OK
• DONE
  Status: 4 NOTEs