• using R version 3.6.0 beta (2019-04-15 r76395)
  • using platform: x86_64-apple-darwin15.6.0 (64-bit)
  • using session charset: UTF-8
  • checking for file ‘DivMelt/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘DivMelt’ version ‘1.0.3’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘DivMelt’ can be installed ... [13s/24s] OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking dependencies in R code ... NOTE
    'library' or 'require' call to ‘glmnet’ which was already attached by Depends.
      Please remove these calls from your code.
    Packages in Depends field not imported from:
      ‘glmnet’ ‘tcltk’
      These packages need to be imported from (in the NAMESPACE file)
      for when this namespace is loaded but not attached.
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... [12s/23s] NOTE
    DivMelt_gui: no visible global function definition for ‘tktoplevel’
    DivMelt_gui: no visible global function definition for ‘tkwm.title’
    DivMelt_gui: no visible global function definition for ‘tkwm.geometry’
    DivMelt_gui: no visible global function definition for ‘tkfont.create’
    DivMelt_gui: no visible global function definition for ‘tclVar’
    DivMelt_gui : loadSettings: no visible global function definition for
      ‘tclvalue<-’
    DivMelt_gui : loadSettings: no visible global function definition for
      ‘tkmessageBox’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tktoplevel’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkwm.deiconify’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkgrab.set’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkfocus’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkwm.title’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkwm.geometry’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkframe’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkgrid.columnconfigure’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkgrid.configure’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tclvalue’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tklabel’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkgrid’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tclVar’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkbutton’
    DivMelt_gui : showOptions : <anonymous>: no visible global function
      definition for ‘tclvalue<-’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkwait.variable’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkProgressBar’
    DivMelt_gui : showOptions : updateBar: no visible global function
      definition for ‘setTkProgressBar’
    DivMelt_gui : showOptions : updateBar: no visible global function
      definition for ‘tcl’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘setTkProgressBar’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkmessageBox’
    DivMelt_gui : showOptions : <anonymous>: no visible global function
      definition for ‘tkmessageBox’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkgrab.release’
    DivMelt_gui : showOptions: no visible global function definition for
      ‘tkdestroy’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tktoplevel’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkwm.deiconify’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkgrab.set’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkfocus’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkwm.title’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkwm.geometry’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkwidget’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkgrid.columnconfigure’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkgrid.configure’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tklabel’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkbutton’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkbind’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkentry’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkconfigure’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkgrid’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tclVar’
    DivMelt_gui : inputDlg : <anonymous>: no visible global function
      definition for ‘tclvalue<-’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkwait.variable’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkgrab.release’
    DivMelt_gui : inputDlg: no visible global function definition for
      ‘tkdestroy’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tktoplevel’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkwm.deiconify’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkgrab.set’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkfocus’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkwm.title’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkwm.geometry’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkwidget’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkgrid.columnconfigure’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tklabel’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkbind’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkradiobutton’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkconfigure’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkgrid’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkgrid.configure’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkcheckbutton’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkentry’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tclVar’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkbutton’
    DivMelt_gui : plottingDlg : <anonymous>: no visible global function
      definition for ‘tclvalue<-’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkwait.variable’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkgrab.release’
    DivMelt_gui : plottingDlg: no visible global function definition for
      ‘tkdestroy’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tktoplevel’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkwm.deiconify’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkgrab.set’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkfocus’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkwm.title’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkwm.geometry’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkwidget’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkgrid.columnconfigure’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tklabel’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkbind’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkcheckbutton’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkconfigure’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkgrid’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkgrid.configure’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tclvalue’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkscale’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkbutton’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkentry’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tclVar’
    DivMelt_gui : analysisDlg : <anonymous>: no visible global function
      definition for ‘tclvalue<-’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkwait.variable’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkgrab.release’
    DivMelt_gui : analysisDlg: no visible global function definition for
      ‘tkdestroy’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tktoplevel’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkwm.deiconify’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkgrab.set’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkfocus’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkwm.title’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkwm.geometry’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkwidget’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkgrid.columnconfigure’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tklabel’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkbutton’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkentry’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkbind’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkgrid’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkgrid.configure’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkconfigure’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tclVar’
    DivMelt_gui : outputDlg : <anonymous>: no visible global function
      definition for ‘tclvalue<-’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkwait.variable’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkgrab.release’
    DivMelt_gui : outputDlg: no visible global function definition for
      ‘tkdestroy’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkconfigure’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tcl’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tclvalue’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tktoplevel’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkwm.deiconify’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkgrab.set’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkfocus’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkwm.title’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkwm.geometry’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkwidget’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkgrid.columnconfigure’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkgrid.configure’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkscrollbar’
    DivMelt_gui : viewCommand : <anonymous>: no visible global function
      definition for ‘tkyview’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tklistbox’
    DivMelt_gui : viewCommand : <anonymous>: no visible global function
      definition for ‘tkset’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkgrid’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkinsert’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkbind’
    DivMelt_gui : viewCommand : <anonymous>: no visible global function
      definition for ‘tkcurselection’
    DivMelt_gui : viewCommand : <anonymous>: no visible global function
      definition for ‘tkmessageBox’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tclVar’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkbutton’
    DivMelt_gui : viewCommand : <anonymous>: no visible global function
      definition for ‘tclvalue<-’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkwait.variable’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkgrab.release’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkdestroy’
    DivMelt_gui : viewCommand: no visible global function definition for
      ‘tkmessageBox’
    DivMelt_gui : loadCommand: no visible global function definition for
      ‘tclvalue’
    DivMelt_gui : loadCommand: no visible global function definition for
      ‘tkgetOpenFile’
    DivMelt_gui : saveCommand: no visible global function definition for
      ‘tclvalue’
    DivMelt_gui : saveCommand: no visible global function definition for
      ‘tkgetSaveFile’
    DivMelt_gui : saveCommand: no visible global function definition for
      ‘tkmessageBox’
    DivMelt_gui : exitCommand: no visible global function definition for
      ‘tkmessageBox’
    DivMelt_gui : exitCommand: no visible global function definition for
      ‘tkdestroy’
    DivMelt_gui : selectOutputDir: no visible global function definition
      for ‘tclvalue’
    DivMelt_gui : selectOutputDir: no visible global function definition
      for ‘tkchooseDirectory’
    DivMelt_gui : selectOutputDir: no visible global function definition
      for ‘tclvalue<-’
    DivMelt_gui : selectDir: no visible global function definition for
      ‘tclvalue’
    DivMelt_gui : selectDir: no visible global function definition for
      ‘tkchooseDirectory’
    DivMelt_gui : selectDir: no visible global function definition for
      ‘tclvalue<-’
    DivMelt_gui : selectFile: no visible global function definition for
      ‘tclvalue’
    DivMelt_gui : selectFile: no visible global function definition for
      ‘tkgetOpenFile’
    DivMelt_gui : selectFile: no visible global function definition for
      ‘tclvalue<-’
    DivMelt_gui : selectScoreFile: no visible global function definition
      for ‘tclvalue’
    DivMelt_gui : selectScoreFile: no visible global function definition
      for ‘tkgetOpenFile’
    DivMelt_gui : selectScoreFile: no visible global function definition
      for ‘tclvalue<-’
    DivMelt_gui : selectModelFile: no visible global function definition
      for ‘tclvalue’
    DivMelt_gui : selectModelFile: no visible global function definition
      for ‘tkgetOpenFile’
    DivMelt_gui : selectModelFile: no visible global function definition
      for ‘tclvalue<-’
    DivMelt_gui : helpDialog: no visible global function definition for
      ‘tkmessageBox’
    DivMelt_gui: no visible global function definition for ‘tkwidget’
    DivMelt_gui: no visible global function definition for ‘tkbutton’
    DivMelt_gui: no visible global function definition for ‘tkgrid’
    DivMelt_gui: no visible global function definition for
      ‘tkgrid.columnconfigure’
    DivMelt_gui: no visible global function definition for
      ‘tkgrid.rowconfigure’
    DivMelt_gui: no visible global function definition for ‘tkfocus’
    modelDivMelt: no visible global function definition for ‘read.csv’
    modelDivMelt: no visible global function definition for ‘cv.glmnet’
    modelDivMelt: no visible global function definition for ‘predict’
    modelDivMelt: no visible global function definition for ‘coef’
    processDivMelt: no visible global function definition for ‘data’
    processDivMelt: no visible global function definition for ‘pdf’
    processDivMelt: no visible global function definition for ‘layout’
    processDivMelt: no visible global function definition for ‘par’
    processDivMelt: no visible global function definition for ‘png’
    processDivMelt: no visible global function definition for ‘plot.new’
    processDivMelt: no visible global function definition for ‘text’
    processDivMelt: no visible global function definition for ‘plot’
    processDivMelt: no visible global function definition for ‘lines’
    processDivMelt: no visible global function definition for ‘lowess’
    processDivMelt: no visible global function definition for ‘lm’
    processDivMelt: no visible global function definition for ‘sd’
    processDivMelt: no visible global function definition for ‘loess’
    processDivMelt: no visible global function definition for ‘segments’
    processDivMelt: no visible global function definition for ‘abline’
    processDivMelt: no visible global function definition for ‘predict’
    processDivMelt: no visible global function definition for ‘title’
    processDivMelt: no visible global function definition for ‘dev.off’
    Undefined global functions or variables:
      abline coef cv.glmnet data dev.off layout lines lm loess lowess par
      pdf plot plot.new png predict read.csv sd segments setTkProgressBar
      tcl tclVar tclvalue tclvalue<- text title tkProgressBar tkbind
      tkbutton tkcheckbutton tkchooseDirectory tkconfigure tkcurselection
      tkdestroy tkentry tkfocus tkfont.create tkframe tkgetOpenFile
      tkgetSaveFile tkgrab.release tkgrab.set tkgrid tkgrid.columnconfigure
      tkgrid.configure tkgrid.rowconfigure tkinsert tklabel tklistbox
      tkmessageBox tkradiobutton tkscale tkscrollbar tkset tktoplevel
      tkwait.variable tkwidget tkwm.deiconify tkwm.geometry tkwm.title
      tkyview
    Consider adding
      importFrom("grDevices", "dev.off", "pdf", "png")
      importFrom("graphics", "abline", "layout", "lines", "par", "plot",
                 "plot.new", "segments", "text", "title")
      importFrom("stats", "coef", "lm", "loess", "lowess", "predict", "sd")
      importFrom("utils", "data", "read.csv")
    to your NAMESPACE file.
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking examples ...