* installing *source* package ‘BNPmix’ ...
** package ‘BNPmix’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c BNPmix_init.c -o BNPmix_init.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c CommonUtilities.cpp -o CommonUtilities.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c DdpFunctions.cpp -o DdpFunctions.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c Distributions.cpp -o Distributions.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c IcsFunctions.cpp -o IcsFunctions.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c MAR.cpp -o MAR.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c MarFunctions.cpp -o MarFunctions.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c SliFunctions.cpp -o SliFunctions.o
IcsFunctions.cpp:404:65: warning: unused variable 'mu_m' [-Wunused-variable]
double m_temp, s2_temp, tau1_temp, tau2_temp, a_temp, b_temp, mu_m;
^
IcsFunctions.cpp:940:10: warning: unused variable 'd' [-Wunused-variable]
double d = (double) data.n_cols;
^
MarFunctions.cpp:340:65: warning: variable 'mu_m' set but not used [-Wunused-but-set-variable]
double m_temp, s2_temp, tau1_temp, tau2_temp, a_temp, b_temp, mu_m;
^
IcsFunctions.cpp:1277:10: warning: unused variable 'd' [-Wunused-variable]
double d = (double) data.n_cols;
^
IcsFunctions.cpp:1395:65: warning: variable 'mu_m' set but not used [-Wunused-but-set-variable]
double m_temp, s2_temp, tau1_temp, tau2_temp, a_temp, b_temp, mu_m;
^
IcsFunctions.cpp:2009:9: warning: unused variable 'nj' [-Wunused-variable]
int nj = sum(clust == j);
^
IcsFunctions.cpp:2091:10: warning: unused variable 'tsigma2' [-Wunused-variable]
double tsigma2;
^
MarFunctions.cpp:951:7: warning: unused variable 'old_max' [-Wunused-variable]
int old_max = max(clust);
^
MarFunctions.cpp:1101:65: warning: variable 'mu_m' set but not used [-Wunused-but-set-variable]
double m_temp, s2_temp, tau1_temp, tau2_temp, a_temp, b_temp, mu_m;
^
MarFunctions.cpp:1585:9: warning: unused variable 'nj' [-Wunused-variable]
int nj = sum(clust == j);
^
MarFunctions.cpp:1668:10: warning: unused variable 'tsigma2' [-Wunused-variable]
double tsigma2;
^
MarFunctions.cpp:1732:10: warning: unused variable 'an' [-Wunused-variable]
double an, bn, prob_temp;
^
MarFunctions.cpp:1732:14: warning: unused variable 'bn' [-Wunused-variable]
double an, bn, prob_temp;
^
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c cDDP.cpp -o cDDP.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c cICS.cpp -o cICS.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c cSLI.cpp -o cSLI.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppDist/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c est_partition.cpp -o est_partition.o
cDDP.cpp:138:10: warning: unused variable 'temp2' [-Wunused-variable]
double temp2;
^
1 warning generated.
6 warnings generated.
7 warnings generated.
clang++ -arch x86_64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o BNPmix.so BNPmix_init.o CommonUtilities.o DdpFunctions.o Distributions.o IcsFunctions.o MAR.o MarFunctions.o RcppExports.o SliFunctions.o cDDP.o cICS.o cSLI.o est_partition.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/BNPmix.Rcheck/00LOCK-BNPmix/00new/BNPmix/libs
** generating debug symbols (dSYM)
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BNPmix)