* installing *source* package ‘APIS’ ...
** package ‘APIS’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c APIS_init_Recom.c -o APIS_init_Recom.o
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c calculate_likelihood.c -o calculate_likelihood.o
calculate_likelihood.c:503:25: warning: equality comparison with extraneous parentheses [-Wparentheses-equality]
          if ((allele_A == 0)) {
               ~~~~~~~~~^~~~
calculate_likelihood.c:503:25: note: remove extraneous parentheses around the comparison to silence this warning
          if ((allele_A == 0)) {
              ~         ^   ~
calculate_likelihood.c:503:25: note: use '=' to turn this equality comparison into an assignment
          if ((allele_A == 0)) {
                        ^~
                        =
calculate_likelihood.c:607:25: warning: equality comparison with extraneous parentheses [-Wparentheses-equality]
          if ((allele_A == 0)) {
               ~~~~~~~~~^~~~
calculate_likelihood.c:607:25: note: remove extraneous parentheses around the comparison to silence this warning
          if ((allele_A == 0)) {
              ~         ^   ~
calculate_likelihood.c:607:25: note: use '=' to turn this equality comparison into an assignment
          if ((allele_A == 0)) {
                        ^~
                        =
2 warnings generated.
clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o APIS.so APIS_init_Recom.o calculate_likelihood.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/high-sierra-x86_64/results/4.2/APIS.Rcheck/00LOCK-APIS/00new/APIS/libs
** generating debug symbols (dSYM)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (APIS)