• using R version 4.4.3 (2025-02-28)
• using platform: aarch64-apple-darwin20
• R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 12.2.0
• running under: macOS Ventura 13.7.8
• using session charset: UTF-8
• checking for file ‘tram/DESCRIPTION’ ... OK
• this is package ‘tram’ version ‘1.3-0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘tram’ can be installed ... [3s/3s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [3s/3s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [14s/14s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [70s/70s] OK   Running ‘Coxph-Ex.R’ [3s/3s]   Comparing ‘Coxph-Ex.Rout’ to ‘Coxph-Ex.Rout.save’ ... OK   Running ‘KaplanMeier-Ex.R’ [1s/1s]   Running ‘PI_OVL-Ex.R’ [1s/1s]   Running ‘Polr-Ex.R’ [5s/5s]   Comparing ‘Polr-Ex.Rout’ to ‘Polr-Ex.Rout.save’ ... OK   Running ‘Survreg-Ex.R’ [1s/1s]   Comparing ‘Survreg-Ex.Rout’ to ‘Survreg-Ex.Rout.save’ ... OK   Running ‘bugfixes.R’ [15s/15s]   Running ‘intercepts-Ex.R’ [1s/1s]   Comparing ‘intercepts-Ex.Rout’ to ‘intercepts-Ex.Rout.save’ ... OK   Running ‘mmlt-Ex.R’ [25s/25s]   Comparing ‘mmlt-Ex.Rout’ to ‘mmlt-Ex.Rout.save’ ... OK   Running ‘mmlt-interface.R’ [8s/8s]   Running ‘mtram-Ex.R’ [3s/3s]   Comparing ‘mtram-Ex.Rout’ to ‘mtram-Ex.Rout.save’ ... OK   Running ‘stram-Ex.R’ [8s/8s]   Comparing ‘stram-Ex.Rout’ to ‘stram-Ex.Rout.save’ ... OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [205s/207s] WARNING Error(s) in re-building vignettes: --- re-building ‘NAMI.Rnw’ using knitr Error: processing vignette 'NAMI.Rnw' failed with diagnostics: Running 'texi2dvi' on 'NAMI.tex' failed. LaTeX errors: ! LaTeX Error: File `accents.sty' not found. Type X to quit or <RETURN> to proceed, or enter new name. (Default extension: sty) ! Emergency stop. <read *>           l.27 \usepackage                 {color}^^M ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘NAMI.Rnw’ --- re-building ‘mtram.Rnw’ using knitr Error: processing vignette 'mtram.Rnw' failed with diagnostics: Running 'texi2dvi' on 'mtram.tex' failed. LaTeX errors: ! LaTeX Error: File `accents.sty' not found. Type X to quit or <RETURN> to proceed, or enter new name. (Default extension: sty) ! Emergency stop. <read *>           l.27 \usepackage                 {color}^^M ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘mtram.Rnw’ --- re-building ‘survtram.Rnw’ using knitr Warning in doTryCatch(return(expr), name, parentenv, handler) :   semi-transparency is not supported on this device: reported only once per page Warning in doTryCatch(return(expr), name, parentenv, handler) :   semi-transparency is not supported on this device: reported only once per page Warning in doTryCatch(return(expr), name, parentenv, handler) :   semi-transparency is not supported on this device: reported only once per page Error: processing vignette 'survtram.Rnw' failed with diagnostics: Running 'texi2dvi' on 'survtram.tex' failed. LaTeX errors: ! LaTeX Error: File `accents.sty' not found. Type X to quit or <RETURN> to proceed, or enter new name. (Default extension: sty) ! Emergency stop. <read *>           l.48 ^^M          ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘survtram.Rnw’ --- re-building ‘tram.Rnw’ using knitr Error: processing vignette 'tram.Rnw' failed with diagnostics: Running 'texi2dvi' on 'tram.tex' failed. LaTeX errors: ! LaTeX Error: File `accents.sty' not found. Type X to quit or <RETURN> to proceed, or enter new name. (Default extension: sty) ! Emergency stop. <read *>           l.28 \usepackage                 {rotating}^^M ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘tram.Rnw’ SUMMARY: processing the following files failed:   ‘NAMI.Rnw’ ‘mtram.Rnw’ ‘survtram.Rnw’ ‘tram.Rnw’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [2s/2s] OK
• DONE Status: 1 WARNING
• using check arguments '--no-clean-on-error '