* installing *source* package ‘smoothbp’ ... ** this is package ‘smoothbp’ version ‘0.2.8’ ** package ‘smoothbp’ successfully unpacked and MD5 sums checked ** using staged installation Using cargo 1.91.1 (ea2d97820 2025-10-10) Using rustc 1.91.1 (ed61e7d7e 2025-11-07) Building for CRAN. Writing `src/Makevars`. `tools/config.R` has finished. ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.1.sdk’ clang -arch arm64 -std=gnu2x -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c entrypoint.c -o entrypoint.o if [ -d ./vendor ]; then \ echo "=== Using offline vendor directory ==="; \ mkdir -p /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/.cargo && \ printf '[source.crates-io]\nreplace-with = "vendored-sources"\n\n[source.vendored-sources]\ndirectory = "/Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/vendor"\n' > /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/.cargo/config.toml; \ elif [ -f ./rust/vendor.tar.xz ]; then \ echo "=== Using offline vendor tarball ==="; \ tar xf rust/vendor.tar.xz && \ mkdir -p /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/.cargo && \ printf '[source.crates-io]\nreplace-with = "vendored-sources"\n\n[source.vendored-sources]\ndirectory = "/Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/vendor"\n' > /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/.cargo/config.toml; \ fi === Using offline vendor tarball === export CARGO_HOME=/Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/.cargo && \ export MAKEFLAGS="" && \ export PATH="/opt/gfortran/bin:/opt/R/arm64/bin:/Library/TeX/texbin:/usr/texbin:/opt/R/arm64/gfortran/bin:/usr/local/bin:/usr/local/gfortran/bin:/usr/local/teTeX/bin/arm64-apple-darwin-current:/Library/Frameworks/R.framework/Resources/bin:/opt/gfortran/bin:/opt/R/arm64/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Users/rbuild/.cargo/bin" && \ RUSTFLAGS=" --print=native-static-libs" cargo build -j 2 --offline --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target Compiling autocfg v1.5.0 Compiling proc-macro2 v1.0.106 Compiling libm v0.2.16 Compiling num-traits v0.2.19 Compiling quote v1.0.45 Compiling unicode-ident v1.0.24 Compiling libc v0.2.186 Compiling zerocopy v0.8.48 Compiling paste v1.0.15 Compiling bytemuck v1.25.0 Compiling cfg-if v1.0.4 Compiling getrandom v0.2.17 Compiling safe_arch v0.7.4 Compiling crossbeam-utils v0.8.21 Compiling wide v0.7.33 Compiling rand_core v0.6.4 Compiling ppv-lite86 v0.2.21 Compiling num-complex v0.4.6 Compiling approx v0.5.1 Compiling syn v2.0.117 Compiling matrixmultiply v0.3.10 Compiling syn v1.0.109 Compiling rand_chacha v0.3.1 Compiling num-integer v0.1.46 Compiling extendr-ffi v0.9.0 Compiling rawpointer v0.2.1 Compiling num-rational v0.4.2 Compiling crossbeam-epoch v0.9.18 Compiling rand v0.8.6 Compiling rayon-core v1.13.0 Compiling typenum v1.20.0 Compiling rand_distr v0.4.3 Compiling crossbeam-deque v0.8.6 Compiling simba v0.6.0 Compiling nalgebra-macros v0.1.0 Compiling lazy_static v1.5.0 Compiling extendr-api v0.9.0 Compiling extendr-macros v0.9.0 Compiling nalgebra v0.29.0 Compiling readonly v0.2.13 Compiling nalgebra-macros v0.2.2 Compiling simba v0.9.1 Compiling either v1.15.0 Compiling once_cell v1.21.4 Compiling statrs v0.16.1 Compiling rayon v1.12.0 Compiling nalgebra v0.33.3 Compiling smoothbp v0.1.0 (/Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/rust) warning: unused import: `extendr_api::prelude` --> src/bridge.rs:6:5 | 6 | use extendr_api::prelude::*; | ^^^^^^^^^^^^^^^^^^^^ | = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default warning: fields `p_b0`, `p_b1`, `p_deltas`, `p_om`, and `p_rho` are never read --> src/model.rs:80:9 | 41 | pub struct Priors { | ------ fields in this struct ... 80 | pub p_b0: usize, | ^^^^ 81 | pub p_b1: usize, | ^^^^ 82 | pub p_deltas: Vec, | ^^^^^^^^ 83 | pub p_om: Vec, | ^^^^ 84 | pub p_rho: Vec, | ^^^^^ | = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default note: link against the following native artifacts when linking against this static library. The order and any duplication can be significant on some platforms. note: native-static-libs: -lc -lm -liconv -lR -lSystem -lc -lm warning: `smoothbp` (lib) generated 2 warnings Finished `release` profile [optimized] target(s) in 1m 03s # Always clean up CARGOTMP rm -Rf /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/.cargo; clang -arch arm64 -std=gnu2x -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o smoothbp.so entrypoint.o -L./rust/target/release -lsmoothbp -F/Library/Frameworks/R.framework/.. -framework R rm -Rf /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/.cargo /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/vendor ./rust/target installing to /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00LOCK-smoothbp/00new/smoothbp/libs ** generating debug symbols (dSYM) warning: (arm64) /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/./rust/target/release/libsmoothbp.a(std-478fce78004a205f.std.61e3cf0e49db9e2-cgu.0.rcgu.o) unable to open object file: No such file or directory warning: (arm64) /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/./rust/target/release/libsmoothbp.a(panic_unwind-94469ee954f3a0ad.panic_unwind.346ed8875cadb263-cgu.0.rcgu.o) unable to open object file: No such file or directory warning: (arm64) /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/./rust/target/release/libsmoothbp.a(hashbrown-429032899dc837aa.hashbrown.b223c639777fddc9-cgu.0.rcgu.o) unable to open object file: No such file or directory warning: (arm64) /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/./rust/target/release/libsmoothbp.a(alloc-0519d0a3831de83e.alloc.9f300485f014b380-cgu.0.rcgu.o) unable to open object file: No such file or directory warning: (arm64) /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/./rust/target/release/libsmoothbp.a(core-19a4bfc8f68687d7.core.5e47c8f4dec2dc26-cgu.0.rcgu.o) unable to open object file: No such file or directory warning: (arm64) /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/./rust/target/release/libsmoothbp.a(compiler_builtins-280d7aeef4a08f72.compiler_builtins.ad497b731f529524-cgu.007.rcgu.o) unable to open object file: No such file or directory warning: (arm64) /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/./rust/target/release/libsmoothbp.a(compiler_builtins-280d7aeef4a08f72.compiler_builtins.ad497b731f529524-cgu.155.rcgu.o) unable to open object file: No such file or directory warning: (arm64) /Volumes/Builds/packages/big-sur-arm64/results/4.5/smoothbp.Rcheck/00_pkg_src/smoothbp/src/./rust/target/release/libsmoothbp.a(compiler_builtins-280d7aeef4a08f72.compiler_builtins.ad497b731f529524-cgu.188.rcgu.o) unable to open object file: No such file or directory ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (smoothbp)