• using R version 4.4.0 alpha (2024-03-31 r86238)
  • using platform: aarch64-apple-darwin20
  • R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 12.2.0
  • running under: macOS Ventura 13.4
  • using session charset: UTF-8
  • checking for file ‘rareNMtests/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘rareNMtests’ version ‘1.2’
  • checking package namespace information ... OK
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  • checking whether package ‘rareNMtests’ can be installed ... [3s/3s] OK See the install log for details.
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
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  • checking whether the package can be loaded ... [1s/1s] OK
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  • checking whether the package can be unloaded cleanly ... [1s/1s] OK
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  • checking loading without being on the library search path ... [1s/1s] OK
  • checking dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
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  • checking R code for possible problems ... [3s/3s] OK
  • checking Rd files ... [0s/0s] NOTE checkRd: (-1) BiogTest.individual.Rd:25: Lost braces     25 | \item{powerfun}{ By default rarefied richness is estimated for all subsample sizes, from 1 to \emph{n}, where \emph{n} is the total number of individuals in the sample. If \code{powerfun} is less than 1, it decreases the total number of subsamples as a power function of \{h{n}. }        | ^ checkRd: (-1) BiogTest.individual.Rd:66: Lost braces     66 | Chao, A., Gotelli, N.J., Hsieh, T.C., Sander, E.L., Ma, K.H., Colwell, R.K. & Ellison, A.M. (2014). Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies. emph{Ecological Monographs} 84: 45-67.        | ^ checkRd: (-1) BiogTest.individual.Rd:68: Lost braces     68 | Limpert, E., Stahel, W.A. & Abbt, M. (2001). Log-normal distributions across the sciences: keys and clues. emph{BioScience} 51: 341-352.        | ^ checkRd: (-1) BiogTest.individual.Rd:70: Lost braces     70 | O'Hara, R.B. (2005). Species richness estimators: how many species can dance on the head of a pin? emph{Journal of Animal Ecology} 74: 375-386.        | ^ checkRd: (-1) EcoTest.individual.Rd:57: Lost braces     57 | Chao, A., Gotelli, N.J., Hsieh, T.C., Sander, E.L., Ma, K.H., Colwell, R.K. & Ellison, A.M. (2014). Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies. emph{Ecological Monographs} 84: 45-67.        | ^ checkRd: (-1) rarefaction.individual.Rd:37: Lost braces     37 | Chao, A., Gotelli, N.J., Hsieh, T.C., Sander, E.L., Ma, K.H., Colwell, R.K. & Ellison, A.M. (2014). Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies. emph{Ecological Monographs} 84: 45-67.        | ^ checkRd: (-1) rarefaction.individual.Rd:39: Lost braces     39 | Chao, A. & Jost, J. (2012). Coverage-based rarefaction and extrapolation: standardizing samples by completeness rather than size. emph{Ecology} 93: 2533-2547.        | ^ checkRd: (-1) rarefaction.individual.Rd:41: Lost braces     41 | Hill, M.O. (1973). Diversity and evenness: a unifying notation and its consequences. emph{Ecology} 54: 427-432.        | ^
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  • checking examples ... [1s/1s] OK
  • checking PDF version of manual ... [4s/4s] OK
  • DONE Status: 1 NOTE
  • using check arguments '--no-clean-on-error '