* installing *source* package ‘rCausalMGM’ ...
** package ‘rCausalMGM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c Bootstrap.cpp -o Bootstrap.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c Boss.cpp -o Boss.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c CensoredVariable.cpp -o CensoredVariable.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c ChoiceGenerator.cpp -o ChoiceGenerator.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c ContinuousVariable.cpp -o ContinuousVariable.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c CoxIRLSRegression.cpp -o CoxIRLSRegression.o
In file included from Bootstrap.cpp:1:
In file included from inc/Bootstrap.hpp:4:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from CoxIRLSRegression.cpp:1:
In file included from inc/CoxIRLSRegression.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from ChoiceGenerator.cpp:1:
In file included from inc/ChoiceGenerator.hpp:4:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from ContinuousVariable.cpp:1:
In file included from inc/ContinuousVariable.hpp:13:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from CensoredVariable.cpp:1:
In file included from inc/CensoredVariable.hpp:15:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from Boss.cpp:3:
In file included from inc/Boss.hpp:6:
In file included from inc/DepthChoiceGenerator.hpp:4:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from CoxIRLSRegression.cpp:1:
In file included from inc/CoxIRLSRegression.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from Bootstrap.cpp:1:
In file included from inc/Bootstrap.hpp:4:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c CoxMGM.cpp -o CoxMGM.o
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c CoxMGMParams.cpp -o CoxMGMParams.o
In file included from CoxMGM.cpp:1:
In file included from inc/CoxMGM.hpp:7:
In file included from inc/ConvexProximal.hpp:15:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c CoxRegression.cpp -o CoxRegression.o
In file included from CoxRegression.cpp:1:
In file included from inc/CoxRegression.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from CoxMGM.cpp:1:
In file included from inc/CoxMGM.hpp:7:
In file included from inc/ConvexProximal.hpp:15:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from CoxMGMParams.cpp:1:
In file included from inc/CoxMGMParams.hpp:4:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c CoxRegressionResult.cpp -o CoxRegressionResult.o
In file included from CoxRegression.cpp:1:
In file included from inc/CoxRegression.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c DataSet.cpp -o DataSet.o
In file included from DataSet.cpp:1:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from CoxRegressionResult.cpp:1:
In file included from inc/CoxRegressionResult.hpp:4:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c DegenerateGaussianScore.cpp -o DegenerateGaussianScore.o
In file included from DegenerateGaussianScore.cpp:3:
In file included from inc/DegenerateGaussianScore.hpp:4:
In file included from inc/Score.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c DepthChoiceGenerator.cpp -o DepthChoiceGenerator.o
In file included from DataSet.cpp:1:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from DegenerateGaussianScore.cpp:3:
In file included from inc/DegenerateGaussianScore.hpp:4:
In file included from inc/Score.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c DiscreteVariable.cpp -o DiscreteVariable.o
In file included from DepthChoiceGenerator.cpp:1:
In file included from inc/DepthChoiceGenerator.hpp:4:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c Edge.cpp -o Edge.o
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c EdgeListGraph.cpp -o EdgeListGraph.o
In file included from Edge.cpp:1:
In file included from inc/Edge.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from EdgeListGraph.cpp:1:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from DiscreteVariable.cpp:1:
In file included from inc/DiscreteVariable.hpp:13:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c FasStableProducerConsumer.cpp -o FasStableProducerConsumer.o
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c Fci.cpp -o Fci.o
In file included from Edge.cpp:1:
In file included from inc/Edge.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from FasStableProducerConsumer.cpp:1:
In file included from inc/FasStableProducerConsumer.hpp:6:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from Fci.cpp:1:
In file included from inc/Fci.hpp:20:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from EdgeListGraph.cpp:1:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c FciOrient.cpp -o FciOrient.o
In file included from FasStableProducerConsumer.cpp:1:
In file included from inc/FasStableProducerConsumer.hpp:6:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from FciOrient.cpp:1:
In file included from inc/FciOrient.hpp:23:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from Fci.cpp:1:
In file included from inc/Fci.hpp:20:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c GraphUtils.cpp -o GraphUtils.o
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c Grasp.cpp -o Grasp.o
In file included from GraphUtils.cpp:2:
In file included from inc/GraphUtils.hpp:8:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from Grasp.cpp:3:
In file included from inc/Grasp.hpp:7:
In file included from inc/GrowShrinkTree.hpp:5:
In file included from inc/Score.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from FciOrient.cpp:1:
In file included from inc/FciOrient.hpp:23:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from GraphUtils.cpp:2:
In file included from inc/GraphUtils.hpp:8:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from Grasp.cpp:3:
In file included from inc/Grasp.hpp:7:
In file included from inc/GrowShrinkTree.hpp:5:
In file included from inc/Score.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c GrowShrink.cpp -o GrowShrink.o
In file included from GrowShrink.cpp:1:
In file included from inc/GrowShrink.hpp:4:
In file included from inc/Score.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c GrowShrinkTree.cpp -o GrowShrinkTree.o
In file included from GrowShrinkTree.cpp:1:
In file included from inc/GrowShrinkTree.hpp:5:
In file included from inc/Score.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from GrowShrink.cpp:1:
In file included from inc/GrowShrink.hpp:4:
In file included from inc/Score.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c IndTestMulti.cpp -o IndTestMulti.o
In file included from IndTestMulti.cpp:1:
In file included from inc/IndTestMulti.hpp:4:
In file included from inc/IndependenceTest.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c IndTestMultiCox.cpp -o IndTestMultiCox.o
In file included from GrowShrinkTree.cpp:1:
In file included from inc/GrowShrinkTree.hpp:5:
In file included from inc/Score.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c Knowledge.cpp -o Knowledge.o
In file included from IndTestMultiCox.cpp:1:
In file included from inc/IndTestMultiCox.hpp:4:
In file included from inc/IndependenceTest.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from Knowledge.cpp:1:
In file included from inc/Knowledge.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from IndTestMulti.cpp:1:
In file included from inc/IndTestMulti.hpp:4:
In file included from inc/IndependenceTest.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c LinearRegression.cpp -o LinearRegression.o
In file included from LinearRegression.cpp:1:
In file included from inc/LinearRegression.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from IndTestMultiCox.cpp:1:
In file included from inc/IndTestMultiCox.hpp:4:
In file included from inc/IndependenceTest.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c LogisticRegression.cpp -o LogisticRegression.o
In file included from Knowledge.cpp:1:
In file included from inc/Knowledge.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c LogisticRegressionResult.cpp -o LogisticRegressionResult.o
In file included from LogisticRegression.cpp:1:
In file included from inc/LogisticRegression.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from LinearRegression.cpp:1:
In file included from inc/LinearRegression.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c MGM.cpp -o MGM.o
In file included from MGM.cpp:1:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from LogisticRegression.cpp:1:
In file included from inc/LogisticRegression.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from LogisticRegressionResult.cpp:1:
In file included from inc/LogisticRegressionResult.hpp:4:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c MGMParams.cpp -o MGMParams.o
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c MeekRules.cpp -o MeekRules.o
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c Node.cpp -o Node.o
In file included from MeekRules.cpp:1:
In file included from inc/MeekRules.hpp:4:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from Node.cpp:1:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from MGM.cpp:1:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
In file included from MGMParams.cpp:1:
In file included from inc/MGMParams.hpp:4:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c PcStable.cpp -o PcStable.o
In file included from PcStable.cpp:1:
In file included from inc/PcStable.hpp:4:
In file included from inc/IndependenceTest.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from MeekRules.cpp:1:
In file included from inc/MeekRules.hpp:4:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from Node.cpp:1:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c PossibleDsepFciConsumerProducer.cpp -o PossibleDsepFciConsumerProducer.o
3 warnings generated.
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c ProximalGradient.cpp -o ProximalGradient.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
In file included from PcStable.cpp:1:
In file included from inc/PcStable.hpp:4:
In file included from inc/IndependenceTest.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from PossibleDsepFciConsumerProducer.cpp:1:
In file included from inc/PossibleDsepFciConsumerProducer.hpp:18:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from ProximalGradient.cpp:1:
In file included from inc/ProximalGradient.hpp:7:
In file included from inc/ConvexProximal.hpp:15:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c RegressionBicScore.cpp -o RegressionBicScore.o
In file included from PossibleDsepFciConsumerProducer.cpp:1:
In file included from inc/PossibleDsepFciConsumerProducer.hpp:18:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from ProximalGradient.cpp:1:
In file included from inc/ProximalGradient.hpp:7:
In file included from inc/ConvexProximal.hpp:15:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from RegressionBicScore.cpp:3:
In file included from inc/RegressionBicScore.hpp:4:
In file included from inc/Score.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c RegressionResult.cpp -o RegressionResult.o
In file included from RegressionBicScore.cpp:3:
In file included from inc/RegressionBicScore.hpp:4:
In file included from inc/Score.hpp:4:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c STARS.cpp -o STARS.o
In file included from STARS.cpp:1:
In file included from inc/STARS.hpp:4:
In file included from inc/StabilityUtils.hpp:6:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c STEPS.cpp -o STEPS.o
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c SearchCV.cpp -o SearchCV.o
In file included from RegressionResult.cpp:1:
In file included from inc/RegressionResult.hpp:4:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from STEPS.cpp:1:
In file included from inc/STEPS.hpp:4:
In file included from inc/StabilityUtils.hpp:6:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from SearchCV.cpp:3:
In file included from inc/SearchCV.hpp:5:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from STARS.cpp:1:
In file included from inc/STARS.hpp:4:
In file included from inc/StabilityUtils.hpp:6:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c SearchGraphUtils.cpp -o SearchGraphUtils.o
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c SearchWrappers.cpp -o SearchWrappers.o
In file included from SearchGraphUtils.cpp:1:
In file included from inc/SearchGraphUtils.hpp:4:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c SepsetMap.cpp -o SepsetMap.o
In file included from SearchWrappers.cpp:1:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from SepsetMap.cpp:1:
In file included from inc/SepsetMap.hpp:7:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from STEPS.cpp:1:
In file included from inc/STEPS.hpp:4:
In file included from inc/StabilityUtils.hpp:6:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from SearchCV.cpp:3:
In file included from inc/SearchCV.hpp:5:
In file included from inc/DataSet.hpp:15:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from SearchGraphUtils.cpp:1:
In file included from inc/SearchGraphUtils.hpp:4:
In file included from inc/EdgeListGraph.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from SearchWrappers.cpp:1:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from SepsetMap.cpp:1:
In file included from inc/SepsetMap.hpp:7:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c SepsetProducer.cpp -o SepsetProducer.o
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c StabilityUtils.cpp -o StabilityUtils.o
In file included from SepsetProducer.cpp:1:
In file included from inc/SepsetProducer.hpp:6:
In file included from inc/Triple.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from StabilityUtils.cpp:1:
In file included from inc/StabilityUtils.hpp:6:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppThread/include' -I/opt/R/arm64/include -I"inc" -fPIC -falign-functions=64 -Wall -g -O2 -c Triple.cpp -o Triple.o
3 warnings generated.
In file included from Triple.cpp:1:
In file included from inc/Triple.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
In file included from inc/armaLapack.hpp:15:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/RcppCommon.h:29:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
#pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
^
In file included from SepsetProducer.cpp:1:
In file included from inc/SepsetProducer.hpp:6:
In file included from inc/Triple.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from StabilityUtils.cpp:1:
In file included from inc/StabilityUtils.hpp:6:
In file included from inc/MGM.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
In file included from Triple.cpp:1:
In file included from inc/Triple.hpp:4:
In file included from inc/Node.hpp:18:
In file included from inc/Variable.hpp:17:
inc/armaLapack.hpp:17:9: warning: 'NDEBUG' macro redefined [-Wmacro-redefined]
#define NDEBUG
^
<command line>:1:9: note: previous definition is here
#define NDEBUG 1
^
3 warnings generated.
3 warnings generated.
3 warnings generated.
3 warnings generated.
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o rCausalMGM.so Bootstrap.o Boss.o CensoredVariable.o ChoiceGenerator.o ContinuousVariable.o CoxIRLSRegression.o CoxMGM.o CoxMGMParams.o CoxRegression.o CoxRegressionResult.o DataSet.o DegenerateGaussianScore.o DepthChoiceGenerator.o DiscreteVariable.o Edge.o EdgeListGraph.o FasStableProducerConsumer.o Fci.o FciOrient.o GraphUtils.o Grasp.o GrowShrink.o GrowShrinkTree.o IndTestMulti.o IndTestMultiCox.o Knowledge.o LinearRegression.o LogisticRegression.o LogisticRegressionResult.o MGM.o MGMParams.o MeekRules.o Node.o PcStable.o PossibleDsepFciConsumerProducer.o ProximalGradient.o RcppExports.o RegressionBicScore.o RegressionResult.o STARS.o STEPS.o SearchCV.o SearchGraphUtils.o SearchWrappers.o SepsetMap.o SepsetProducer.o StabilityUtils.o Triple.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld: warning: could not create compact unwind for ___emutls_get_address: registers 23 and 24 not saved contiguously in frame
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.4/rCausalMGM.Rcheck/00LOCK-rCausalMGM/00new/rCausalMGM/libs
** generating debug symbols (dSYM)
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rCausalMGM)