- using R version 4.1.1 Patched (2021-09-05 r80862)
- using platform: aarch64-apple-darwin20 (64-bit)
- using session charset: UTF-8
- checking for file ‘markovchain/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘markovchain’ version ‘0.9.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘markovchain’ can be installed ... [50s/54s] OK
- checking installed package size ... NOTE
installed size is 10.2Mb
sub-directories of 1Mb or more:
libs 8.5Mb
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [4s/4s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking R/sysdata.rda ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [1s/1s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [2s/2s] OK
Running ‘testthat.R’ [2s/2s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [1s/1s] NONE
‘an_introduction_to_markovchain_package.Rmd’ using ‘UTF-8’... [0s/0s] OK
‘gsoc_2017_additions.Rmd’ using ‘UTF-8’... [0s/0s] OK
‘higher_order_markov_chains.Rmd’ using ‘UTF-8’... [0s/0s] OK
- checking re-building of vignette outputs ... [41s/44s] WARNING
Error(s) in re-building vignettes:
--- re-building ‘an_introduction_to_markovchain_package.Rmd’ using rmarkdown
Package: markovchain
Version: 0.9.0
Date: 2022-07-01
BugReport: https://github.com/spedygiorgio/markovchain/issues
! LaTeX Error: File `orcidlink.sty' not found.
! Emergency stop.
<read *>
Error: processing vignette 'an_introduction_to_markovchain_package.Rmd' failed with diagnostics:
LaTeX failed to compile /Volumes/Builds/packages/big-sur-arm64/results/4.1/markovchain.Rcheck/vign_test/markovchain/vignettes/an_introduction_to_markovchain_package.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See an_introduction_to_markovchain_package.log for more info.
--- failed re-building ‘an_introduction_to_markovchain_package.Rmd’
--- re-building ‘gsoc_2017_additions.Rmd’ using rmarkdown
Package: markovchain
Version: 0.9.0
Date: 2022-07-01
BugReport: https://github.com/spedygiorgio/markovchain/issues
--- finished re-building ‘gsoc_2017_additions.Rmd’
--- re-building ‘higher_order_markov_chains.Rmd’ using rmarkdown
Loading required package: markovchain
Package: markovchain
Version: 0.9.0
Date: 2022-07-01
BugReport: https://github.com/spedygiorgio/markovchain/issues
This function is experimental
! LaTeX Error: File `orcidlink.sty' not found.
! Emergency stop.
<read *>
Error: processing vignette 'higher_order_markov_chains.Rmd' failed with diagnostics:
LaTeX failed to compile /Volumes/Builds/packages/big-sur-arm64/results/4.1/markovchain.Rcheck/vign_test/markovchain/vignettes/higher_order_markov_chains.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See higher_order_markov_chains.log for more info.
--- failed re-building ‘higher_order_markov_chains.Rmd’
SUMMARY: processing the following files failed:
‘an_introduction_to_markovchain_package.Rmd’
‘higher_order_markov_chains.Rmd’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... OK
- DONE
Status: 1 WARNING, 1 NOTE
- using check arguments '--no-clean-on-error '