• using R version 4.4.0 alpha (2024-03-31 r86238)
  • using platform: aarch64-apple-darwin20
  • R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 12.2.0
  • running under: macOS Ventura 13.4
  • using session charset: UTF-8
  • checking for file ‘gamlr/DESCRIPTION’ ... OK
  • this is package ‘gamlr’ version ‘1.13-8’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘gamlr’ can be installed ... [4s/5s] OK See the install log for details.
  • used C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
  • used SDK: ‘MacOSX11.3.sdk’
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking code files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... [1s/1s] OK
  • checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
  • checking whether the package can be unloaded cleanly ... [1s/1s] OK
  • checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
  • checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
  • checking loading without being on the library search path ... [1s/1s] OK
  • checking dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... [3s/3s] OK
  • checking Rd files ... [0s/0s] NOTE checkRd: (-1) naref.Rd:13: Lost braces     13 | \details{ For every \code{factor} or \code{character} column in \code{x}, \code{naref} sets \code{NA} as the reference level for a \code{factor} variable. Columns coded as \code{character} class are first converted to factors via \R{factor(x)}. If \code{impute=TRUE} then the numeric columns are converted to two columns, one appended \code{.x} that contains imputed values and another appended \code{.miss} which is a binary variable indicating whether the original value was missing. Numeric columns are returned without change if \code{impute=FALSE} or if they do not contain any missing values.        | ^
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... [1s/1s] OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking compilation flags in Makevars ... OK
  • checking for GNU extensions in Makefiles ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking use of PKG_*FLAGS in Makefiles ... OK
  • checking compiled code ... OK
  • checking examples ... [3s/3s] OK
  • checking PDF version of manual ... [4s/4s] OK
  • DONE Status: 1 NOTE
  • using check arguments '--no-clean-on-error '