* installing *source* package ‘SubTite’ ...
** package ‘SubTite’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 13.0.0 (clang-1300.0.29.30)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c SUBGROUP.cpp -o SUBGROUP.o
SUBGROUP.cpp:186:7: warning: unused variable 'j' [-Wunused-variable]
  int j=0;
      ^
SUBGROUP.cpp:250:7: warning: unused variable 'j' [-Wunused-variable]
  int j=0;
      ^
SUBGROUP.cpp:532:10: warning: unused variable 'DEC' [-Wunused-variable]
  double DEC=0;
         ^
SUBGROUP.cpp:430:7: warning: unused variable 'Group' [-Wunused-variable]
  int Group=0;
      ^
SUBGROUP.cpp:521:10: warning: unused variable 'sigvar' [-Wunused-variable]
  double sigvar=1;
         ^
SUBGROUP.cpp:434:7: warning: unused variable 'rep' [-Wunused-variable]
  int rep=0; //For the simulation repetition.
      ^
SUBGROUP.cpp:433:7: warning: unused variable 'i' [-Wunused-variable]
  int i=0; //For the patient index
      ^
SUBGROUP.cpp:420:7: warning: unused variable 'IntIN' [-Wunused-variable]
  int IntIN=0;
      ^
SUBGROUP.cpp:418:7: warning: unused variable 'MEANS' [-Wunused-variable]
  int MEANS=0;
      ^
SUBGROUP.cpp:465:10: warning: unused variable 'signew' [-Wunused-variable]
  double signew=0;
         ^
SUBGROUP.cpp:421:7: warning: unused variable 'IntOUT' [-Wunused-variable]
  int IntOUT=0;
      ^
SUBGROUP.cpp:455:10: warning: unused variable 'NewMean' [-Wunused-variable]
  double NewMean=0;
         ^
SUBGROUP.cpp:457:7: warning: unused variable 'Which1' [-Wunused-variable]
  int Which1=0;
      ^
SUBGROUP.cpp:515:10: warning: unused variable 'trialtime' [-Wunused-variable]
  double trialtime=0;
         ^
SUBGROUP.cpp:458:7: warning: unused variable 'J' [-Wunused-variable]
  int J=Dose.n_rows; //Number of Doses
      ^
SUBGROUP.cpp:456:10: warning: unused variable 'NewSlope' [-Wunused-variable]
  double NewSlope=0;
         ^
SUBGROUP.cpp:1949:10: warning: unused variable 'NewMean' [-Wunused-variable]
  double NewMean=0;
         ^
SUBGROUP.cpp:1952:7: warning: unused variable 'J' [-Wunused-variable]
  int J=Dose.n_rows; //Number of Doses
      ^
SUBGROUP.cpp:1950:10: warning: unused variable 'NewSlope' [-Wunused-variable]
  double NewSlope=0;
         ^
SUBGROUP.cpp:1951:7: warning: unused variable 'Which1' [-Wunused-variable]
  int Which1=0;
      ^
SUBGROUP.cpp:2010:10: warning: unused variable 'trialtime' [-Wunused-variable]
  double trialtime=0;
         ^
SUBGROUP.cpp:1924:7: warning: unused variable 'Group' [-Wunused-variable]
  int Group=0;
      ^
SUBGROUP.cpp:2016:10: warning: unused variable 'sigvar' [-Wunused-variable]
  double sigvar=1;
         ^
SUBGROUP.cpp:1928:7: warning: unused variable 'rep' [-Wunused-variable]
  int rep=0; //For the simulation repetition.
      ^
SUBGROUP.cpp:2027:10: warning: unused variable 'DEC' [-Wunused-variable]
  double DEC=0;
         ^
SUBGROUP.cpp:1927:7: warning: unused variable 'i' [-Wunused-variable]
  int i=0; //For the patient index
      ^
SUBGROUP.cpp:1912:7: warning: unused variable 'MEANS' [-Wunused-variable]
  int MEANS=0;
      ^
SUBGROUP.cpp:1915:7: warning: unused variable 'IntOUT' [-Wunused-variable]
  int IntOUT=0;
      ^
SUBGROUP.cpp:1959:10: warning: unused variable 'signew' [-Wunused-variable]
  double signew=0;
         ^
SUBGROUP.cpp:1914:7: warning: unused variable 'IntIN' [-Wunused-variable]
  int IntIN=0;
      ^
SUBGROUP.cpp:3481:10: warning: unused variable 'Munew' [-Wunused-variable]
  double Munew=0;
         ^
SUBGROUP.cpp:3565:7: warning: unused variable 'eta2' [-Wunused-variable]
  int eta2=0;
      ^
SUBGROUP.cpp:3517:10: warning: unused variable 'IntSlope' [-Wunused-variable]
  double IntSlope=1;
         ^
SUBGROUP.cpp:3421:7: warning: unused variable 'IntOUT' [-Wunused-variable]
  int IntOUT=0;
      ^
SUBGROUP.cpp:3420:7: warning: unused variable 'IntIN' [-Wunused-variable]
  int IntIN=0;
      ^
SUBGROUP.cpp:3480:10: warning: unused variable 'slopenew' [-Wunused-variable]
  double slopenew=0;
         ^
SUBGROUP.cpp:3492:7: warning: unused variable 'StoreInx' [-Wunused-variable]
  int StoreInx=0;
      ^
SUBGROUP.cpp:3418:7: warning: unused variable 'MEANS' [-Wunused-variable]
  int MEANS=0;
      ^
SUBGROUP.cpp:3479:10: warning: unused variable 'signew' [-Wunused-variable]
  double signew=0;
         ^
SUBGROUP.cpp:3477:10: warning: unused variable 'alpha' [-Wunused-variable]
  double alpha=0;
         ^
SUBGROUP.cpp:3537:10: warning: unused variable 'IntSig' [-Wunused-variable]
  double IntSig=1;
         ^
SUBGROUP.cpp:3478:10: warning: unused variable 'U' [-Wunused-variable]
  double U=0;
         ^
SUBGROUP.cpp:3538:10: warning: unused variable 'sigvar' [-Wunused-variable]
  double sigvar=1;
         ^
SUBGROUP.cpp:3471:7: warning: unused variable 'Which1' [-Wunused-variable]
  int Which1=0;
      ^
SUBGROUP.cpp:3470:10: warning: unused variable 'NewSlope' [-Wunused-variable]
  double NewSlope=0;
         ^
SUBGROUP.cpp:3536:10: warning: unused variable 'NumSig' [-Wunused-variable]
  double NumSig=2;
         ^
SUBGROUP.cpp:3469:10: warning: unused variable 'NewMean' [-Wunused-variable]
  double NewMean=0;
         ^
SUBGROUP.cpp:3467:10: warning: unused variable 'sig' [-Wunused-variable]
  double sig=T1;
         ^
SUBGROUP.cpp:3465:10: warning: unused variable 'mu' [-Wunused-variable]
  double mu=meanmu;
         ^
SUBGROUP.cpp:3466:10: warning: unused variable 'slope' [-Wunused-variable]
  double slope=meanslope;
         ^
SUBGROUP.cpp:3514:10: warning: unused variable 'NumMu' [-Wunused-variable]
  double NumMu = 2;
         ^
SUBGROUP.cpp:3530:10: warning: unused variable 'muvar' [-Wunused-variable]
  double muvar=1;
         ^
SUBGROUP.cpp:3531:10: warning: unused variable 'slopevar' [-Wunused-variable]
  double slopevar=1;
         ^
SUBGROUP.cpp:3424:10: warning: unused variable 'varbeta1' [-Wunused-variable]
  double varbeta1=varbeta;
         ^
SUBGROUP.cpp:3516:10: warning: unused variable 'IntMu' [-Wunused-variable]
  double IntMu=1;
         ^
SUBGROUP.cpp:3515:10: warning: unused variable 'NumSlope' [-Wunused-variable]
  double NumSlope=2;
         ^
SUBGROUP.cpp:3426:10: warning: unused variable 'varint1' [-Wunused-variable]
  double varint1=varint;
         ^
57 warnings generated.
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o SubTite.so RcppExports.o SUBGROUP.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.3/SubTite.Rcheck/00LOCK-SubTite/00new/SubTite/libs
** generating debug symbols (dSYM)
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SubTite)