Install log for 'QFASA'

* installing *source* package ‘QFASA’ ...
** package ‘QFASA’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
#/Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('ErrorModelSimpleEquant.cpp','-O0 -g', safebounds=FALSE,safeunload=FALSE)"
/Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('ErrorModelSimpleEquant.cpp',safebounds=FALSE,safeunload=FALSE)"
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include" -I"/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include"   -DTMB_EIGEN_DISABLE_WARNINGS   -DTMB_LIB_INIT=R_init_ErrorModelSimpleEquant  -DCPPAD_FRAMEWORK -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c ErrorModelSimpleEquant.cpp -o ErrorModelSimpleEquant.o
In file included from ErrorModelSimpleEquant.cpp:3:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/TMB.hpp:112:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/cppad.hpp:34:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/ode_gear.hpp:489:6: warning: variable 'sign' set but not used [-Wunused-but-set-variable]
        int sign;
            ^
In file included from ErrorModelSimpleEquant.cpp:3:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/TMB.hpp:112:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/cppad.hpp:39:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/romberg_mul.hpp:277:10: warning: variable 'pow2' set but not used [-Wunused-but-set-variable]
                size_t pow2 = 1;
                       ^
2 warnings generated.
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o ErrorModelSimpleEquant.so ErrorModelSimpleEquant.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
[1] 0
Warning message:
In checkMatrixPackageVersion() : Package version inconsistency detected.
TMB was built with Matrix version 1.6.2
Current Matrix version is 1.6.3
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
#/Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('CommonDiet.cpp','-O0 -g',safebounds=FALSE,safeunload=FALSE)"
/Library/Frameworks/R.framework/Resources/bin/Rscript --vanilla -e "TMB::compile('CommonDiet.cpp',safebounds=FALSE,safeunload=FALSE)"
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include" -I"/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include"   -DTMB_EIGEN_DISABLE_WARNINGS   -DTMB_LIB_INIT=R_init_CommonDiet  -DCPPAD_FRAMEWORK -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c CommonDiet.cpp -o CommonDiet.o
In file included from CommonDiet.cpp:7:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/TMB.hpp:112:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/cppad.hpp:34:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/ode_gear.hpp:489:6: warning: variable 'sign' set but not used [-Wunused-but-set-variable]
        int sign;
            ^
In file included from CommonDiet.cpp:7:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/TMB.hpp:112:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/cppad.hpp:39:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/TMB/include/cppad/romberg_mul.hpp:277:10: warning: variable 'pow2' set but not used [-Wunused-but-set-variable]
                size_t pow2 = 1;
                       ^
2 warnings generated.
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o CommonDiet.so CommonDiet.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
[1] 0
Warning message:
In checkMatrixPackageVersion() : Package version inconsistency detected.
TMB was built with Matrix version 1.6.2
Current Matrix version is 1.6.3
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
# Comment here preserves the prior tab
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.3/QFASA.Rcheck/00LOCK-QFASA/00new/QFASA/libs
** generating debug symbols (dSYM)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (QFASA)