* installing *source* package ‘OpenMx’ ...
** package ‘OpenMx’ successfully unpacked and MD5 sums checked
** using staged installation
NOTE: ./configure is not an autoconf generated script.
Change default C/C++ compiler and default compile flags by editing ~/.R/Makevars
** libs
using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using Fortran compiler: ‘GNU Fortran (GCC) 12.2.0’
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++17
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c Compute.cpp -o Compute.o
In file included from Compute.cpp:25:
In file included from ./glue.h:23:
In file included from ./omxState.h:48:
In file included from ./omxExpectation.h:37:
In file included from ./omxData.h:54:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
Compute.cpp:1650:45: warning: struct 'omxCompute' was previously declared as a class; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
LeaveComputeWithVarGroup(FitContext *u_fc, struct omxCompute *compute) : fc(u_fc), name(compute->name) {
^
./Compute.h:364:7: note: previous use is here
class omxCompute {
^
Compute.cpp:1650:45: note: did you mean class here?
LeaveComputeWithVarGroup(FitContext *u_fc, struct omxCompute *compute) : fc(u_fc), name(compute->name) {
^~~~~~
class
2 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c ComputeGD.cpp -o ComputeGD.o
In file included from ComputeGD.cpp:18:
In file included from ./omxState.h:48:
In file included from ./omxExpectation.h:37:
In file included from ./omxData.h:54:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
ComputeGD.cpp:1610:1: warning: 'ComputeGenSA' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class ComputeGenSA : public omxCompute {
^
./asa_usr_asa.h:577:5: note: did you mean class here?
OPTIONAL_PTR_TYPE *Asa_Data_Ptr;
^
./asa_usr_asa.h:46:27: note: expanded from macro 'OPTIONAL_PTR_TYPE'
#define OPTIONAL_PTR_TYPE struct ComputeGenSA
^
ComputeGD.cpp:201:25: warning: private field 'gradientAlgo' is not used [-Wunused-private-field]
enum GradientAlgorithm gradientAlgo;
^
ComputeGD.cpp:202:6: warning: private field 'gradientIterations' is not used [-Wunused-private-field]
int gradientIterations;
^
ComputeGD.cpp:203:9: warning: private field 'gradientStepSize' is not used [-Wunused-private-field]
double gradientStepSize;
^
5 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c ComputeNM.cpp -o ComputeNM.o
In file included from ComputeNM.cpp:18:
In file included from ./omxState.h:48:
In file included from ./omxExpectation.h:37:
In file included from ./omxData.h:54:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c ComputeNR.cpp -o ComputeNR.o
In file included from ComputeNR.cpp:17:
In file included from ./omxState.h:48:
In file included from ./omxExpectation.h:37:
In file included from ./omxData.h:54:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c ComputeSD.cpp -o ComputeSD.o
In file included from ComputeSD.cpp:3:
In file included from ./ComputeGD.h:20:
In file included from ./Compute.h:23:
In file included from ./glue.h:23:
In file included from ./omxState.h:48:
In file included from ./omxExpectation.h:37:
In file included from ./omxData.h:54:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c FellnerFitFunction.cpp -o FellnerFitFunction.o
In file included from FellnerFitFunction.cpp:22:
In file included from ./glue.h:23:
In file included from ./omxState.h:48:
In file included from ./omxExpectation.h:37:
In file included from ./omxData.h:54:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
In file included from FellnerFitFunction.cpp:29:
In file included from ./RAMInternal.h:12:
./path.h:250:10: warning: unused variable 'symVec' [-Wunused-variable]
auto &symVec = symSolver.eigenvectors();
^
./path.h:399:11: warning: unused variable 'symVec' [-Wunused-variable]
auto &symVec = symSolver.eigenvectors();
^
3 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c MarkovExpectation.cpp -o MarkovExpectation.o
In file included from MarkovExpectation.cpp:17:
In file included from ./omxExpectation.h:36:
In file included from ./omxAlgebra.h:26:
In file included from ./omxState.h:49:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c MarkovFF.cpp -o MarkovFF.o
In file included from MarkovFF.cpp:17:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
1 warning generated.
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c asa.c -o asa.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c asubnp.cpp -o asubnp.o
In file included from asubnp.cpp:12:
In file included from ./omxCsolnp.h:21:
In file included from ./Compute.h:23:
In file included from ./glue.h:23:
In file included from ./omxState.h:48:
In file included from ./omxExpectation.h:37:
In file included from ./omxData.h:54:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
asubnp.cpp:22:13: warning: unknown pragma ignored [-Wunknown-pragmas]
#pragma GCC optimize ("no-var-tracking-assignments")
^
2 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c ba81quad.cpp -o ba81quad.o
In file included from ba81quad.cpp:18:
./ba81quad.h:1018:12: warning: unused variable 'numThreads' [-Wunused-variable]
const int numThreads = quad.numThreads;
^
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c dmvnorm.cpp -o dmvnorm.o
In file included from dmvnorm.cpp:4:
In file included from ./glue.h:23:
In file included from ./omxState.h:48:
In file included from ./omxExpectation.h:37:
In file included from ./omxData.h:54:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c fitMultigroup.cpp -o fitMultigroup.o
In file included from fitMultigroup.cpp:18:
In file included from ./omxExpectation.h:36:
In file included from ./omxAlgebra.h:26:
In file included from ./omxState.h:49:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
1 warning generated.
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c general.c -o general.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c glue.cpp -o glue.o
In file included from glue.cpp:24:
In file included from ./glue.h:23:
In file included from ./omxState.h:48:
In file included from ./omxExpectation.h:37:
In file included from ./omxData.h:54:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c matlogexp.cpp -o matlogexp.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c matrix.cpp -o matrix.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c mvbvn.f -o mvbvn.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c nanotimer.cpp -o nanotimer.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c omxAlgebra.cpp -o omxAlgebra.o
In file included from omxAlgebra.cpp:31:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c omxAlgebraFitFunction.cpp -o omxAlgebraFitFunction.o
In file included from omxAlgebraFitFunction.cpp:17:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/rpf/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Matrix/include' -I/opt/R/arm64/include -DSTRICT_R_HEADERS -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c omxData.cpp -o omxData.o
In file included from omxData.cpp:27:
In file included from ./omxData.h:53:
In file included from ./omxAlgebra.h:26:
In file included from ./omxState.h:49:
./omxFitFunction.h:42:1: warning: 'omxFitFunction' defined as a class here but previously declared as a struct; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
class omxFitFunction {
^
./omxDefines.h:137:9: note: did you mean class here?
typedef struct omxFitFunction omxFitFunction;
^~~~~~
class
In file included from omxData.cpp:30:
In file included from ./omxExpectationBA81.h:21:
./ba81quad.h:1018:12: warning: unused variable 'numThreads' [-Wunused-variable]
const int numThreads = quad.numThreads;
^
In file included from omxData.cpp:30:
./omxExpectationBA81.h:98:2: warning: struct 'omxFitFunction' was previously declared as a class; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags]
struct omxFitFunction *fit; // weak pointer
^
./omxFitFunction.h:42:7: note: previous use is here
class omxFitFunction {
^
./omxExpectationBA81.h:98:2: note: did you mean class here?
struct omxFitFunction *fit; // weak pointer
^~~~~~
class
omxData.cpp:282:16: error: use of undeclared identifier 'Rf_isDataFrame'; did you mean 'Rf_isFrame'?
} else if (Rf_isDataFrame(dataLoc)) {
^~~~~~~~~~~~~~
Rf_isFrame
/Library/Frameworks/R.framework/Resources/include/Rinternals.h:1059:10: note: 'Rf_isFrame' declared here
Rboolean Rf_isFrame(SEXP);
^
3 warnings and 1 error generated.
make: *** [omxData.o] Error 1
ERROR: compilation failed for package ‘OpenMx’
* removing ‘/Volumes/Builds/packages/big-sur-arm64/results/4.4/OpenMx.Rcheck/OpenMx’