- using R version 4.5.2 Patched (2026-01-31 r89382)
- using platform: aarch64-apple-darwin20
- R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
- running under: macOS Ventura 13.7.8
- using session charset: UTF-8
- checking for file ‘MiCT/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘MiCT’ version ‘2.0.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘MiCT’ can be installed ... [1s/1s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [2s/2s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [1s/1s] ERROR
Running examples in ‘MiCT-Ex.R’ failed
The error most likely occurred in:
> ### Name: lcfa_model
> ### Title: Generate lavaan syntax for longitudinal CFA MIC estimation
> ### Aliases: lcfa_model
>
> ### ** Examples
>
> set.seed(123)
> sim <- simdat(N = 100)
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so':
dlopen(/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so, 0x0006): Symbol not found: __ZN3tbb4task13note_affinityEt
Referenced from: <54874AC9-C2D6-35D2-B691-7795CC173DDF> /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so
Expected in: <19808012-A1B2-3B09-96AF-8CD76F4F4F8D> /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppParallel/lib/libtbb.dylib
Calls: simdat ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [1s/1s] ERROR
Running ‘testthat.R’ [1s/1s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(MiCT)
>
> test_check("MiCT")
Saving _problems/test_mic-3.R
Saving _problems/test_mic-16.R
Saving _problems/test_mic-33.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_mic.R:3:3'): simdat returns expected structure ─────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so':
dlopen(/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so, 0x0006): Symbol not found: __ZN3tbb4task13note_affinityEt
Referenced from: <54874AC9-C2D6-35D2-B691-7795CC173DDF> /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so
Expected in: <19808012-A1B2-3B09-96AF-8CD76F4F4F8D> /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppParallel/lib/libtbb.dylib
Backtrace:
▆
1. ├─MiCT::simdat(N = 100, add_change = TRUE) at test_mic.R:3:3
2. └─base::loadNamespace(x)
3. ├─base::namespaceImportFrom(...)
4. │ └─base::asNamespace(ns)
5. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
6. ├─base::namespaceImportFrom(...)
7. │ └─base::asNamespace(ns)
8. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
9. └─base::library.dynam(lib, package, package.lib)
10. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test_mic.R:16:3'): mic_iapm returns MIC estimates ───────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so':
dlopen(/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so, 0x0006): Symbol not found: __ZN3tbb4task13note_affinityEt
Referenced from: <54874AC9-C2D6-35D2-B691-7795CC173DDF> /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so
Expected in: <19808012-A1B2-3B09-96AF-8CD76F4F4F8D> /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppParallel/lib/libtbb.dylib
Backtrace:
▆
1. ├─MiCT::simdat(N = 200, add_change = TRUE) at test_mic.R:16:3
2. └─base::loadNamespace(x)
3. ├─base::namespaceImportFrom(...)
4. │ └─base::asNamespace(ns)
5. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
6. ├─base::namespaceImportFrom(...)
7. │ └─base::asNamespace(ns)
8. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
9. └─base::library.dynam(lib, package, package.lib)
10. └─base::dyn.load(file, DLLpath = DLLpath, ...)
── Error ('test_mic.R:33:3'): mic_roc runs without bootstrap ───────────────────
Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so':
dlopen(/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so, 0x0006): Symbol not found: __ZN3tbb4task13note_affinityEt
Referenced from: <54874AC9-C2D6-35D2-B691-7795CC173DDF> /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/qs2/libs/qs2.so
Expected in: <19808012-A1B2-3B09-96AF-8CD76F4F4F8D> /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppParallel/lib/libtbb.dylib
Backtrace:
▆
1. ├─MiCT::simdat(N = 200) at test_mic.R:33:3
2. └─base::loadNamespace(x)
3. ├─base::namespaceImportFrom(...)
4. │ └─base::asNamespace(ns)
5. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
6. ├─base::namespaceImportFrom(...)
7. │ └─base::asNamespace(ns)
8. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
9. └─base::library.dynam(lib, package, package.lib)
10. └─base::dyn.load(file, DLLpath = DLLpath, ...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 0 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [3s/4s] OK
- DONE
Status: 2 ERRORs