• using R version 4.5.2 Patched (2026-01-31 r89382)
• using platform: aarch64-apple-darwin20
• R was compiled by     Apple clang version 16.0.0 (clang-1600.0.26.6)     GNU Fortran (GCC) 14.2.0
• running under: macOS Ventura 13.7.8
• using session charset: UTF-8
• checking for file ‘Mercator/DESCRIPTION’ ... OK
• this is package ‘Mercator’ version ‘1.1.8’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘Mercator’ can be installed ... [7s/9s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
• checking loading without being on the library search path ... [2s/2s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s/4s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [2s/2s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [3s/3s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [12s/11s] ERROR   Running ‘test-01Metrics.R’ [3s/3s]   Comparing ‘test-01Metrics.Rout’ to ‘test-01Metrics.Rout.save’ ... OK   Running ‘test-02binmat.R’ [2s/2s]   Comparing ‘test-02binmat.Rout’ to ‘test-02binmat.Rout.save’ ... OK   Running ‘test-03thresh.R’ [7s/6s] Running the tests in ‘tests/test-03thresh.R’ failed. Complete output:   > library("Mercator")   Loading required package: Thresher   Loading required package: ClassDiscovery   Loading required package: cluster   Loading required package: oompaBase   Loading required package: PCDimension   > data("CML1000")   >   > # transposition   > bm <-t(CML1000)   > bm <- removeDuplicateFeatures(bm)   > summary(bm)   An object of the 'BinaryMatrix' class, of size   [1] 1057 597   History:   [1] "Newly created." "Duplicate features removed."   [3] "transposed" "Subsetted."   [5] "transposed" "Duplicates removed."   >   > # run the thresher algorithm to remove "useless" vectors   > thrash <- threshLGF(bm, cutoff = 0.5)   Error in La.svd(x, nu, nv) : error code 1 from Lapack routine 'dgesdd'   Calls: threshLGF -> Reaper -> Thresher -> SamplePCA -> svd -> La.svd   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [21s/21s] OK
• checking PDF version of manual ... [4s/4s] OK
• DONE

Status: 1 ERROR